| Dead end protein homolog 1 (RNA-binding motif, single-stranded-interacting protein 4) | DND1 RBMS4 | Q8IYX4 | 3 |
| Death-inducer obliterator 1 (DIO-1) (hDido1) (Death-associated transcription factor 1) (DATF-1) | DIDO1 C20orf158 DATF1 KIAA0333 | Q9BTC0 | 3 |
| Dedicator of cytokinesis protein 7 | DOCK7 KIAA1771 | Q96N67 | 3 |
| Defender against cell death 1 variant (Fragment) | 0 | Q53G02 | 3 |
| Dehydrogenase/reductase SDR family member 13 (EC 1.1.-.-) | DHRS13 UNQ419/PRO853 | Q6UX07 | 3 |
| DENN domain-containing protein 2A | DENND2A KIAA1277 | Q9ULE3 | 3 |
| Dermatan-sulfate epimerase-like protein (EC 5.1.-.-) | DSEL C18orf4 NCAG1 | Q8IZU8 | 3 |
| Desert hedgehog protein (DHH) (HHG-3) [Cleaved into: Desert hedgehog protein N-product; Desert hedgehog protein C-product] | DHH | O43323 | 3 |
| Diacylglycerol kinase alpha (DAG kinase alpha) (EC 2.7.1.107) (80 kDa diacylglycerol kinase) (Diglyceride kinase alpha) (DGK-alpha) | DGKA DAGK DAGK1 | P23743 | 3 |
| Diacylglycerol O-acyltransferase 2 (EC 2.3.1.20) (Acyl-CoA retinol O-fatty-acyltransferase) (ARAT) (Retinol O-fatty-acyltransferase) (EC 2.3.1.76) (Diglyceride acyltransferase 2) | DGAT2 HMFN1045 UNQ738/PRO1433 | Q96PD7 | 3 |
| Diamine acetyltransferase 2 (EC 2.3.1.57) (Polyamine N-acetyltransferase 2) (Spermidine/spermine N(1)-acetyltransferase 2) (Thialysine N-epsilon-acetyltransferase) | SAT2 SSAT2 | Q96F10 | 3 |
| Dihydrolipoamide S-acetyltransferase (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex mitochondrial) (cDNA FLJ32737 fis, clone TESTI2001269, highly similar to Homo sapiens dihydrolipoamide S-acetyltransferase, mRNA) | DLAT | Q86YI5 | 3 |
| Dihydropyrimidinase-like 3 | DPYSL3 | Q8IXW6 | 3 |
| Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2) | TFB2M NS5ATP5 | Q9H5Q4 | 3 |
| Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC 1.14.13.8) (Dimethylaniline oxidase 2) (FMO 1B1) (Pulmonary flavin-containing monooxygenase 2) (FMO 2) | FMO2 | Q99518 | 3 |
| Dimethylarginine dimethylaminohydrolase 1, isoform CRA_b (cDNA, FLJ92778, Homo sapiens dimethylarginine dimethylaminohydrolase 1 (DDAH1), mRNA) | DDAH1 hCG_2040048 | B1AKK2 | 3 |
| Dipeptidase 3 (EC 3.4.13.19) | DPEP3 UNQ834/PRO1772 | Q9H4B8 | 3 |
| Dipeptidyl peptidase 9 (DP9) (EC 3.4.14.5) (Dipeptidyl peptidase IV-related protein 2) (DPRP-2) (Dipeptidyl peptidase IX) (DPP IX) (Dipeptidyl peptidase-like protein 9) (DPLP9) | DPP9 DPRP2 | Q86TI2 | 3 |
| Diphthine synthase (EC 2.1.1.98) | DPH5 hCG_32849 | B3KWP1 | 3 |
| Diphthine--ammonia ligase (EC 6.3.1.14) (ATP-binding domain-containing protein 4) (Diphthamide synthase) (Diphthamide synthetase) (Protein DPH6 homolog) | DPH6 ATPBD4 | Q7L8W6 | 3 |
| Disintegrin and metalloproteinase domain-containing protein 11 (ADAM 11) (Metalloproteinase-like, disintegrin-like, and cysteine-rich protein) (MDC) | ADAM11 MDC | O75078 | 3 |
| Disks large homolog 1 (Synapse-associated protein 97) (SAP-97) (SAP97) (hDlg) | DLG1 | Q12959 | 3 |
| Disks large homolog 2 (Channel-associated protein of synapse-110) (Chapsyn-110) (Postsynaptic density protein PSD-93) | DLG2 | Q15700 | 3 |
| DMA protein (HLA-DMA protein) (Major histocompatibility complex, class II, DM alpha) (Major histocompatibility complex, class II, DM alpha, isoform CRA_c) (cDNA FLJ75740, highly similar to Homo sapiens major histocompatibility complex, class II, DM alpha (HLA-DMA), mRNA) | DMA HLA-DMA hCG_2001572 | Q31604 | 3 |
| DNA dC->dU-editing enzyme APOBEC-3F (EC 3.5.4.-) (Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3F) (A3F) | APOBEC3F | Q8IUX4 | 3 |
| DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G) | APOBEC3G MDS019 | Q9HC16 | 3 |
| DNA helicase B (hDHB) (EC 3.6.4.12) | HELB | Q8NG08 | 3 |
| DNA methyltransferase 1-associated protein 1 (DNMAP1) (DNMT1-associated protein 1) | DMAP1 KIAA1425 | Q9NPF5 | 3 |
| DNA mismatch repair protein Mlh1 (MutL protein homolog 1) | MLH1 COCA2 | P40692 | 3 |
| DNA polymerase (EC 2.7.7.7) (Fragment) | 0 | Q59FA0 | 3 |
| DNA polymerase epsilon subunit 2 (EC 2.7.7.7) (DNA polymerase II subunit 2) (DNA polymerase epsilon subunit B) | POLE2 DPE2 | P56282 | 3 |
| DNA polymerase sigma (EC 2.7.7.7) (DNA polymerase kappa) (LAK-1) (PAP-associated domain-containing protein 7) (Terminal uridylyltransferase 5) (TUTase 5) (Topoisomerase-related function protein 4-1) (TRF4-1) | PAPD7 POLS TRF4 | Q5XG87 | 3 |
| DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha) | POLG MDP1 POLG1 POLGA | P54098 | 3 |
| DNA polymerase subunit gamma-1 (Polymerase (DNA directed), gamma, isoform CRA_a) | POLG hCG_28647 | E5KNU5 | 3 |
| DNA repair protein XRCC1 (X-ray repair cross-complementing protein 1) | XRCC1 | P18887 | 3 |
| DNA replication complex GINS protein PSF1 (GINS complex subunit 1) | GINS1 KIAA0186 PSF1 | Q14691 | 3 |
| DNA replication factor Cdt1 (Double parked homolog) (DUP) | CDT1 | Q9H211 | 3 |
| DNA replication licensing factor MCM5 (EC 3.6.4.12) (CDC46 homolog) (P1-CDC46) | MCM5 CDC46 | P33992 | 3 |
| DNA-3-methyladenine glycosylase (N-methylpurine-DNA glycosylase, isoform CRA_c) | MPG hCG_22412 | Q1W6H1 | 3 |
| DNA-binding protein inhibitor ID-1 (Class B basic helix-loop-helix protein 24) (bHLHb24) (Inhibitor of DNA binding 1) | ID1 BHLHB24 ID | P41134 | 3 |
| DNA-binding protein inhibitor ID-4 (Class B basic helix-loop-helix protein 27) (bHLHb27) (Inhibitor of DNA binding 4) | ID4 BHLHB27 | P47928 | 3 |
| DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1) | SATB1 | Q01826 | 3 |
| DNA-directed RNA polymerase I subunit RPA12 (Zinc ribbon domain-containing protein 1) | ZNRD1 RPA12 | Q9P1U0 | 3 |
| DNA-directed RNA polymerase II subunit RPB11-b1 | POLR2J2 | F6W009 | 3 |
| DNA-directed RNA polymerase III subunit RPC7 (RNA polymerase III subunit C7) (DNA-directed RNA polymerase III subunit G) (RNA polymerase III 32 kDa subunit) (RPC32) | POLR3G | O15318 | 3 |
| DNA-directed RNA polymerase III subunit RPC7-like (RNA polymerase III subunit C7-like) (DNA-directed RNA polymerase III subunit G-like) | POLR3GL | Q9BT43 | 3 |
| DnaJ (Hsp40) homolog, subfamily C, member 9 (HCG2024613, isoform CRA_a) (cDNA FLJ36843 fis, clone ASTRO2012552, highly similar to DnaJ homolog subfamily C member 9) | DNAJC9 hCG_2024613 | B2RMW6 | 3 |
| DnaJ homolog subfamily B member 14 | DNAJB14 UNQ9427/PRO34683 | Q8TBM8 | 3 |
| DnaJ homolog subfamily B member 9 (Endoplasmic reticulum DNA J domain-containing protein 4) (ER-resident protein ERdj4) (ERdj4) (Microvascular endothelial differentiation gene 1 protein) (Mdg-1) | DNAJB9 MDG1 UNQ743/PRO1471 | Q9UBS3 | 3 |
| DnaJ homolog subfamily C member 17 | DNAJC17 | Q9NVM6 | 3 |
| DNAJB1 protein (DnaJ (Hsp40) homolog, subfamily B, member 1, isoform CRA_a) (cDNA, FLJ93008, Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 1 (DNAJB1),mRNA) (Fragment) | DNAJB1 hCG_1776318 | Q6FHS4 | 3 |
| Docking protein 6 (Downstream of tyrosine kinase 6) | DOK6 DOK5L | Q6PKX4 | 3 |
| Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase (EC 2.4.1.258) (Asparagine-linked glycosylation protein 3 homolog) (Dol-P-Man-dependent alpha(1-3)-mannosyltransferase) (Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase) (Dolichyl-phosphate-mannose--glycolipid alpha-mannosyltransferase) (Not56-like protein) | ALG3 NOT NOT56L | Q92685 | 3 |
| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 | OST4 | P0C6T2 | 3 |
| Double-strand break repair protein MRE11A (Meiotic recombination 11 homolog 1) (MRE11 homolog 1) (Meiotic recombination 11 homolog A) (MRE11 homolog A) | MRE11A HNGS1 MRE11 | P49959 | 3 |
| Doublecortin domain-containing protein 2 (Protein RU2S) | DCDC2 KIAA1154 RU2 | Q9UHG0 | 3 |
| DTYMK protein (Deoxythymidylate kinase (Thymidylate kinase)) (Deoxythymidylate kinase (Thymidylate kinase), isoform CRA_b) (Putative uncharacterized protein tmp_locus_5) (Fragment) | DTYMK tmp_locus_5 hCG_93868 | Q6FGU2 | 3 |
| Dual oxidase maturation factor 1 gamma (Homolog of Drosophila Numb-interacting protein, isoform CRA_b) (cDNA FLJ76085, highly similar to Homo sapiens homolog of Drosophila Numb-interacting protein (NIP), mRNA) | NIP DUOXA1 hCG_2036886 | A8K9Q6 | 3 |
| Dual specificity phosphatase DUPD1 (EC 3.1.3.16) (EC 3.1.3.48) (Dual specificity phosphatase 27) | DUPD1 DUSP27 | Q68J44 | 3 |
| Dual specificity protein phosphatase 14 (EC 3.1.3.16) (EC 3.1.3.48) (MKP-1-like protein tyrosine phosphatase) (MKP-L) (Mitogen-activated protein kinase phosphatase 6) (MAP kinase phosphatase 6) (MKP-6) | DUSP14 MKP6 | O95147 | 3 |
| Dual specificity tyrosine-phosphorylation-regulated kinase 4 (EC 2.7.12.1) | DYRK4 | Q9NR20 | 3 |
| Dynactin-associated protein (Full) | DYNAP C18orf26 | Q8N1N2 | 3 |
| Dynamin-1 (EC 3.6.5.5) | DNM1 DNM | Q05193 | 3 |
| Dynein assembly factor 3, axonemal | DNAAF3 C19orf51 | Q8N9W5 | 3 |
| Dynein heavy chain 1, axonemal (Axonemal beta dynein heavy chain 1) (Ciliary dynein heavy chain 1) (Heat shock regulated protein 1) (HSRF-1) (hDHC7) | DNAH1 DHC7 DNAHC1 KIAA1410 | Q9P2D7 | 3 |
| Dysferlin (Dystrophy-associated fer-1-like protein) (Fer-1-like protein 1) | DYSF FER1L1 | O75923 | 3 |
| Dystrobrevin beta (DTN-B) (Beta-dystrobrevin) | DTNB | O60941 | 3 |
| Dystrophin | DMD | P11532 | 3 |
| E2F-associated phosphoprotein (EAPP) | EAPP C14orf11 BM-036 | Q56P03 | 3 |
| E3 SUMO-protein ligase PIAS3 (EC 6.3.2.-) (Protein inhibitor of activated STAT protein 3) | PIAS3 | Q9Y6X2 | 3 |
| E3 ubiquitin-protein ligase BRE1A (BRE1-A) (hBRE1) (EC 6.3.2.-) (RING finger protein 20) | RNF20 BRE1A | Q5VTR2 | 3 |
| E3 ubiquitin-protein ligase CHIP (EC 6.3.2.-) (Antigen NY-CO-7) (CLL-associated antigen KW-8) (Carboxy terminus of Hsp70-interacting protein) (STIP1 homology and U box-containing protein 1) | STUB1 CHIP PP1131 | Q9UNE7 | 3 |
| E3 ubiquitin-protein ligase MYLIP (EC 6.3.2.-) (Inducible degrader of the LDL-receptor) (Idol) (Myosin regulatory light chain interacting protein) (MIR) | MYLIP BZF1 IDOL BM-023 PP5242 | Q8WY64 | 3 |
| E3 ubiquitin-protein ligase NRDP1 (EC 6.3.2.-) (RING finger protein 41) | RNF41 FLRF NRDP1 SBBI03 | Q9H4P4 | 3 |
| E3 ubiquitin-protein ligase parkin (EC 6.3.2.-) (Parkinson juvenile disease protein 2) (Parkinson disease protein 2) | PARK2 PRKN | O60260 | 3 |
| E3 ubiquitin-protein ligase RFWD3 (EC 6.3.2.-) (RING finger and WD repeat domain-containing protein 3) (RING finger protein 201) | RFWD3 RNF201 | Q6PCD5 | 3 |
| E3 ubiquitin-protein ligase RING2 (EC 6.3.2.-) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) (Protein DinG) (RING finger protein 1B) (RING1b) (RING finger protein 2) (RING finger protein BAP-1) | RNF2 BAP1 DING HIPI3 RING1B | Q99496 | 3 |
| E3 ubiquitin-protein ligase RNF115 (EC 6.3.2.-) (RING finger protein 115) (Rabring 7) (Zinc finger protein 364) | RNF115 ZNF364 | Q9Y4L5 | 3 |
| E3 ubiquitin-protein ligase RNF149 (EC 6.3.2.-) (DNA polymerase-transactivated protein 2) (RING finger protein 149) | RNF149 DNAPTP2 | Q8NC42 | 3 |
| E3 ubiquitin-protein ligase SH3RF1 (EC 6.3.2.-) (Plenty of SH3s) (Protein POSH) (RING finger protein 142) (SH3 domain-containing RING finger protein 1) (SH3 multiple domains protein 2) | SH3RF1 KIAA1494 POSH RNF142 SH3MD2 | Q7Z6J0 | 3 |
| E3 ubiquitin-protein ligase synoviolin (EC 6.3.2.-) (Synovial apoptosis inhibitor 1) | SYVN1 HRD1 KIAA1810 | Q86TM6 | 3 |
| E3 ubiquitin-protein ligase TRIM13 (EC 6.3.2.-) (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Leukemia-associated protein 5) (Putative tumor suppressor RFP2) (RING finger protein 77) (Ret finger protein 2) (Tripartite motif-containing protein 13) | TRIM13 LEU5 RFP2 RNF77 | O60858 | 3 |
| E3 ubiquitin-protein ligase TRIM17 (EC 6.3.2.-) (RING finger protein 16) (Testis RING finger protein) (Tripartite motif-containing protein 17) | TRIM17 RBCC RNF16 TERF | Q9Y577 | 3 |
| E3 ubiquitin-protein ligase TRIM39 (EC 6.3.2.-) (RING finger protein 23) (Testis-abundant finger protein) (Tripartite motif-containing protein 39) | TRIM39 RNF23 TFP | Q9HCM9 | 3 |
| Early endosome antigen 1 (Endosome-associated protein p162) (Zinc finger FYVE domain-containing protein 2) | EEA1 ZFYVE2 | Q15075 | 3 |
| EBPL protein | EBPL | Q6GPH7 | 3 |
| Echinoderm microtubule-associated protein-like 3 (EMAP-3) | EML3 | Q32P44 | 3 |
| Echinoderm microtubule-associated protein-like 4 (EMAP-4) (Restrictedly overexpressed proliferation-associated protein) (Ropp 120) | EML4 C2orf2 EMAPL4 | Q9HC35 | 3 |
| Ectonucleoside triphosphate diphosphohydrolase 6 (NTPDase 6) (EC 3.6.1.6) (CD39 antigen-like 2) | ENTPD6 CD39L2 IL6ST2 | O75354 | 3 |
| EF-hand calcium-binding domain-containing protein 4B (Calcium release-activated calcium channel regulator 2A) (CRAC channel regulator 2A) | EFCAB4B CRACR2A | Q9BSW2 | 3 |
| EH-domain containing 1, isoform CRA_b (cDNA FLJ40523 fis, clone TESTI2046872, highly similar to EH-domain-containing protein 1) (cDNA, FLJ92624, highly similar to Homo sapiens EH-domain containing 1 (EHD1), mRNA) | EHD1 hCG_23386 | B2R5U3 | 3 |
| EIF2S2 protein (Eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa) (Eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa, isoform CRA_b) (cDNA, FLJ93495, highly similar to Homo sapiens eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa (EIF2S2), mRNA) | EIF2S2 hCG_2018881 | Q6IBR8 | 3 |
| ELAV-like protein 1 (Hu-antigen R) (HuR) | ELAVL1 HUR | Q15717 | 3 |
| Ellis-van Creveld syndrome protein (DWF-1) | EVC | P57679 | 3 |
| Elongation factor G, mitochondrial (EF-Gmt) (Elongation factor G 1, mitochondrial) (mEF-G 1) (Elongation factor G1) (hEFG1) | GFM1 EFG EFG1 GFM | Q96RP9 | 3 |
| Elongator complex protein 4 (hELP4) (PAX6 neighbor gene protein) | ELP4 C11orf19 PAXNEB | Q96EB1 | 3 |
| EMILIN-3 (EMILIN-5) (Elastin microfibril interface-located protein 3) (Elastin microfibril interfacer 3) (Elastin microfibril interface-located protein 5) (Elastin microfibril interfacer 5) | EMILIN3 C20orf130 EMILIN5 | Q9NT22 | 3 |
| Endonuclease G, mitochondrial (Endo G) (EC 3.1.30.-) | ENDOG | Q14249 | 3 |
| Endonuclease/exonuclease/phosphatase family domain-containing protein 1 | EEPD1 KIAA1706 | Q7L9B9 | 3 |
| Endophilin-B2 (SH3 domain-containing GRB2-like protein B2) | SH3GLB2 KIAA1848 PP578 | Q9NR46 | 3 |