| ATPase family AAA domain-containing protein 1 (EC 3.6.1.3) (Thorase) | Atad1 | Q9D5T0 | 1 |
| Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein homolog) | Atn1 Drpla | O35126 | 1 |
| Attractin (Protein mahogany) | Atrn Mg Mgca | Q9WU60 | 1 |
| Aurora kinase A (EC 2.7.11.1) (Aurora 2) (Aurora family kinase 1) (Aurora/IPL1-related kinase 1) (ARK-1) (Aurora-related kinase 1) (Ipl1- and aurora-related kinase 1) (Serine/threonine-protein kinase 6) (Serine/threonine-protein kinase Ayk1) (Serine/threonine-protein kinase aurora-A) | Aurka Aik Airk Ark1 Aura Ayk1 Btak Iak1 Stk15 Stk6 | P97477 | 1 |
| Aurora kinase B | Aim1 | E9PVP1 | 1 |
| Aurora kinase C | Aurkc | E9QL04 | 1 |
| Autophagy-related protein 101 | Atg101 | Q9D8Z6 | 1 |
| Autophagy-related protein 13 | Atg13 D2Ertd391e Kiaa0652 | Q91YI1 | 1 |
| Autophagy-related protein 2 homolog A | Atg2a Kiaa0404 | Q6P4T0 | 1 |
| B(0,+)-type amino acid transporter 1 (B(0,+)AT) (Glycoprotein-associated amino acid transporter b0,+AT1) (Solute carrier family 7 member 9) | Slc7a9 Bat1 | Q9QXA6 | 1 |
| B-cell CLL/lymphoma 9-like protein (B-cell lymphoma 9-like protein) (BCL9-like protein) (BCL9-related beta-catenin-binding protein) (Protein BCL9-2) | Bcl9l B9l | Q67FY2 | 1 |
| B-cell lymphoma/leukemia 11B (BCL-11B) (B-cell CLL/lymphoma 11B) (COUP-TF-interacting protein 2) (Radiation-induced tumor suppressor gene 1 protein) (mRit1) | Bcl11b Ctip2 Rit1 | Q99PV8 | 1 |
| B2 bradykinin receptor (B2R) (BK-2 receptor) | Bdkrb2 | P32299 | 1 |
| Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor 4) (Apoptosis inhibitor survivin) (TIAP) | Birc5 Api4 Iap4 | O70201 | 1 |
| BAG family molecular chaperone regulator 3 (BAG-3) (Bcl-2-associated athanogene 3) (Bcl-2-binding protein Bis) | Bag3 Bis MNCb-2243 | Q9JLV1 | 1 |
| BAG family molecular chaperone regulator 4 (BAG-4) (Bcl-2-associated athanogene 4) (Silencer of death domains) | Bag4 Sodd | Q8CI61 | 1 |
| Band 3 anion transport protein (Anion exchange protein 1) (AE 1) (Anion exchanger 1) (MEB3) (Solute carrier family 4 member 1) (CD antigen CD233) | Slc4a1 Ae1 | P04919 | 1 |
| Basic leucine zipper transcriptional factor ATF-like (B-cell-activating transcription factor) (B-ATF) | Batf | O35284 | 1 |
| Basigin (Basic immunoglobulin superfamily) (HT7 antigen) (Membrane glycoprotein gp42) (CD antigen CD147) | Bsg | P18572 | 1 |
| Bcl-2 homologous antagonist/killer | Bak1 | E9QM21 | 1 |
| Bcl-2-like protein 11 (Bcl2-L-11) (Bcl2-interacting mediator of cell death) | Bcl2l11 Bim | O54918 | 1 |
| Bcl-2-like protein 13 (Bcl2-L-13) (Bcl-rambo) (Protein Mil1) | Bcl2l13 Mil1 | P59017 | 1 |
| Bcl2 antagonist of cell death (BAD) (Bcl-2-binding component 6) (Bcl-xL/Bcl-2-associated death promoter) | Bad Bbc6 | Q61337 | 1 |
| Bestrophin-2 (Vitelliform macular dystrophy 2-like protein 1) | Best2 Vmd2l1 | Q8BGM5 | 1 |
| Beta-1-syntrophin (59 kDa dystrophin-associated protein A1 basic component 1) (DAPA1B) (Syntrophin-2) | Sntb1 Snt2b1 | Q99L88 | 1 |
| Beta-A3/A1 crystallin protein (Beta-crystallin A1) (Crystallin, beta A1) | Cryba1 mCG_10833 | Q9QXC6 | 1 |
| Beta-arrestin-1 (Arrestin beta-1) | Arrb1 | Q8BWG8 | 1 |
| Beta-catenin-interacting protein 1 (Inhibitor of beta-catenin and Tcf-4) | Ctnnbip1 Catnbip1 Icat | Q9JJN6 | 1 |
| Beta-chimaerin (Beta-chimerin) (Rho GTPase-activating protein 3) | Chn2 Arhgap3 Bch | Q80XD1 | 1 |
| Beta-citryl-glutamate synthase B (EC 6.3.2.n6) (N-acetyl-aspartyl-glutamate synthetase B) (NAAG synthetase B) (NAAGS) (EC 6.3.2.n6) (Ribosomal protein S6 modification-like protein B) | Rimklb Fam80b Kiaa1238 | Q80WS1 | 1 |
| Beta-crystallin A4 (Beta-A4 crystallin) | Cryba4 | Q9JJV0 | 1 |
| Beta-defensin 1 (BD-1) (mBD-1) (Defensin, beta 1) | Defb1 | P56386 | 1 |
| Beta-defensin 11 (BD-11) (mBD-11) (Defensin, beta 11) | Defb11 | Q8R2I7 | 1 |
| Beta-defensin 18 (BD-18) (mBD-18) (Defensin, beta 18) | Defb18 | Q30KP5 | 1 |
| Beta-defensin 19 (BD-19) (mBD-19) (Defensin, beta 19) (Testis-specific beta-defensin-like protein) | Defb19 Defb24 Tdl | Q8K3I8 | 1 |
| Beta-defensin 38 (BD-38) (mBD-38) (Defensin, beta 38) | Defb38 | Q7TNV7 | 1 |
| Beta-galactosidase-1-like protein 2 (EC 3.2.1.-) | Glb1l2 | Q3UPY5 | 1 |
| Beta-hexosaminidase subunit alpha (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit alpha) (Hexosaminidase subunit A) (N-acetyl-beta-glucosaminidase subunit alpha) | Hexa | P29416 | 1 |
| Betaine--homocysteine S-methyltransferase 1 (EC 2.1.1.5) | Bhmt | O35490 | 1 |
| BH3-interacting domain death agonist (p22 BID) (BID) [Cleaved into: BH3-interacting domain death agonist p15 (p15 BID); BH3-interacting domain death agonist p13 (p13 BID); BH3-interacting domain death agonist p11 (p11 BID)] | Bid | P70444 | 1 |
| Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) | Jmjd6 Kiaa0585 Ptdsr | Q9ERI5 | 1 |
| Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) [Includes: ATP-dependent dihydroxyacetone kinase (DHA kinase) (EC 2.7.1.28) (EC 2.7.1.29) (Glycerone kinase) (Triokinase) (Triose kinase); FAD-AMP lyase (cyclizing) (EC 4.6.1.15) (FAD-AMP lyase (cyclic FMN forming)) (FMN cyclase)] | Dak | Q8VC30 | 1 |
| Biglycan (Bone/cartilage proteoglycan I) (PG-S1) | Bgn | P28653 | 1 |
| Biliverdin reductase A (BVR A) (EC 1.3.1.24) (Biliverdin-IX alpha-reductase) | Blvra | Q9CY64 | 1 |
| Biogenesis of lysosome-related organelles complex 1 subunit 6 (BLOC-1 subunit 6) (Pallid protein) (Pallidin) (Syntaxin 13-interacting protein) | Bloc1s6 P2 Pa Pldn | Q9R0C0 | 1 |
| Biorientation of chromosomes in cell division protein 1 (Biorientation defective protein 1) (Protein FAM44B) | Bod1 Fam44b | Q5SQY2 | 1 |
| Biotin--protein ligase (EC 6.3.4.-) (Biotin apo-protein ligase) [Includes: Biotin--[methylmalonyl-CoA-carboxytransferase] ligase (EC 6.3.4.9); Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase (EC 6.3.4.10) (Holocarboxylase synthetase) (HCS); Biotin--[methylcrotonoyl-CoA-carboxylase] ligase (EC 6.3.4.11); Biotin--[acetyl-CoA-carboxylase] ligase (EC 6.3.4.15)] | Hlcs | Q920N2 | 1 |
| Bleomycin hydrolase (BH) (BLM hydrolase) (BMH) (EC 3.4.22.40) | Blmh | Q8R016 | 1 |
| BMP-2-inducible protein kinase (BIKe) (EC 2.7.11.1) | Bmp2k Bike | Q91Z96 | 1 |
| BMS1 homolog, ribosome assembly protein (Yeast) (BMS1-like, ribosome assembly protein (Yeast)) (Protein Bms1) | Bms1 Bms1l mCG_133436 | Q6PGF5 | 1 |
| Bone marrow stromal antigen 2 (BST-2) (HM1.24 antigen) (CD antigen CD317) | Bst2 | Q8R2Q8 | 1 |
| Bone morphogenetic protein 5 (BMP-5) | Bmp5 Bmp-5 | P49003 | 1 |
| BPI fold-containing family A member 5 (BPI fold-containing family A member Pluncl) (Palate lung and nasal carcinoma-like protein) (Short palate lung and nasal clone protein 5) (Tongue plunc-like protein) (TPL) | Bpifa5 Pluncl Splunc5 | Q9CQX3 | 1 |
| Brain mitochondrial carrier protein 1 (BMCP-1) (Mitochondrial uncoupling protein 5) (UCP 5) (Solute carrier family 25 member 14) | Slc25a14 Bmcp1 Ucp5 | Q9Z2B2 | 1 |
| Brain specific protein 5 (Zinc finger CCCH domain-containing protein 3) (Zinc finger protein 623) | Zfp623 Bsg5 mCG_22108 | Q9CY99 | 1 |
| Brain-specific angiogenesis inhibitor 1 | Bai1 | Q3UHD1 | 1 |
| BRCA1-A complex subunit BRE (BRCA1/BRCA2-containing complex subunit 45) (Brain and reproductive organ-expressed protein) | Bre | Q8K3W0 | 1 |
| BRCA1-A complex subunit RAP80 (Receptor-associated protein 80) (Ubiquitin interaction motif-containing protein 1) | Uimc1 Rap80 Rip110 Rxrip110 | Q5U5Q9 | 1 |
| BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes mitogenic signal propagation) (IMP) | Brap | Q99MP8 | 1 |
| BRCA2 and CDKN1A-interacting protein | Bccip | Q9CWI3 | 1 |
| Brefeldin A-inhibited guanine nucleotide-exchange protein 2 (Brefeldin A-inhibited GEP 2) (ADP-ribosylation factor guanine nucleotide-exchange factor 2) | Arfgef2 Arfgep2 Big2 | A2A5R2 | 1 |
| BRO1 domain-containing protein BROX (BRO1 domain- and CAAX motif-containing protein) | Brox | Q8K2Q7 | 1 |
| Bromodomain and PHD finger containing, 1 (Protein Brpf1) | Brpf1 | Q80XK2 | 1 |
| Bromodomain and PHD finger containing, 3 (Protein Brpf3) | Brpf3 | B2KF05 | 1 |
| Brother of CDO (Protein BOC) | Boc | Q6AZB0 | 1 |
| BTB/POZ domain-containing protein KCTD9 | Kctd9 | Q80UN1 | 1 |
| Btk-PH-domain binding protein (Myeloid/lymphoid or mixed-lineage leukemia (Trithorax homolog, Drosophila) translocated to, 1) (Protein Mllt1) | Mllt1 | Q9ERL0 | 1 |
| Butyrophilin-like protein 9 | Btnl9 | Q8BJE2 | 1 |
| C->U-editing enzyme APOBEC-1 (EC 3.5.4.-) (Apolipoprotein B mRNA-editing enzyme 1) | Apobec1 | P51908 | 1 |
| C-C chemokine receptor type 1 (C-C CKR-1) (CC-CKR-1) (CCR-1) (CCR1) (Macrophage inflammatory protein 1-alpha receptor) (MIP-1alpha-R) (RANTES-R) (CD antigen CD191) | Ccr1 Cmkbr1 | P51675 | 1 |
| C-C chemokine receptor type 6 (C-C CKR-6) (CC-CKR-6) (CCR-6) (KY411) (CD antigen CD196) | Ccr6 Cmkbr6 | O54689 | 1 |
| C-C motif chemokine 19 (Epstein-Barr virus-induced molecule 1 ligand chemokine) (EBI1 ligand chemokine) (ELC) (Small-inducible cytokine A19) | Ccl19 Elc Scya19 | O70460 | 1 |
| C-C motif chemokine 20 (Beta-chemokine exodus-1) (CC chemokine LARC) (CC chemokine ST38) (Liver and activation-regulated chemokine) (Macrophage inflammatory protein 3 alpha) (MIP-3-alpha) (Small-inducible cytokine A20) | Ccl20 Larc Scya20 | O89093 | 1 |
| C-C motif chemokine 6 (Protein C10) (Small-inducible cytokine A6) [Cleaved into: CCL6(22-95); CCL6(23-95)] | Ccl6 C10 Scya6 | P27784 | 1 |
| C-Jun-amino-terminal kinase-interacting protein 3 (JIP-3) (JNK-interacting protein 3) (JNK MAP kinase scaffold protein 3) (JNK/SAPK-associated protein 1) (JSAP1) (Mitogen-activated protein kinase 8-interacting protein 3) (Sunday driver 2) | Mapk8ip3 Jip3 Jsap1 Syd2 | Q9ESN9 | 1 |
| C-type lectin domain family 12 member B | Clec12b | Q149M0 | 1 |
| C-type lectin domain family 14 member A | Clec14a | Q8VCP9 | 1 |
| C-type lectin domain family 2 member D (C-type lectin-related protein B) (Clr-b) (Lectin-like transmembrane protein) (Osteoclast inhibitory lectin) | Clec2d Clrb Ocil | Q91V08 | 1 |
| C-type lectin domain family 3, member b (Tetranectin) | Clec3b Tna | Q8CFZ6 | 1 |
| C-type lectin domain family 4, member a4 (Dendritic cell inhibitory receptor 2) (MCG1050915) (Protein Clec4a4) | Clec4a4 Dcir2 mCG_1050915 | Q5YIR8 | 1 |
| C-type mannose receptor 2 (Lectin lambda) (Macrophage mannose receptor 2) (CD antigen CD280) | Mrc2 Kiaa0709 | Q64449 | 1 |
| C-X-C motif chemokine 10 (10 kDa interferon gamma-induced protein) (Gamma-IP10) (IP-10) (C7) (Interferon-gamma induced protein CRG-2) (Small-inducible cytokine B10) | Cxcl10 Crg2 Ifi10 Inp10 Scyb10 | P17515 | 1 |
| C-X-C motif chemokine 13 (B lymphocyte chemoattractant) (CXC chemokine BLC) (Small-inducible cytokine B13) | Cxcl13 Blc Scyb13 | O55038 | 1 |
| C-X-C motif chemokine 14 (B-cell and monocyte-activating chemokine) (Chemokine BRAK) (Kidney-expressed chemokine CXC) (MIP-2G) (Small-inducible cytokine B14) | Cxcl14 Bmac Kec Ks1 Mip2g Scyb14 | Q9WUQ5 | 1 |
| C-X-C motif chemokine 16 (Scavenger receptor for phosphatidylserine and oxidized low density lipoprotein) (SR-PSOX) (Small-inducible cytokine B16) (Transmembrane chemokine CXCL16) | Cxcl16 Srpsox | Q8BSU2 | 1 |
| C2 domain-containing protein 5 (138 kDa C2 domain-containing phosphoprotein) | C2cd5 Cdp138 Kiaa0528 | Q7TPS5 | 1 |
| Cadherin-13 (Heart cadherin) (H-cadherin) (Truncated cadherin) (T-cad) (T-cadherin) | Cdh13 | Q9WTR5 | 1 |
| Cadherin-17 (BILL-cadherin) (Liver-intestine cadherin) (LI-cadherin) (P130) | Cdh17 | Q9R100 | 1 |
| Cadherin-3 (Placental cadherin) (P-cadherin) | Cdh3 Cdhp | P10287 | 1 |
| Cadherin-5 (Vascular endothelial cadherin) (VE-cadherin) (CD antigen CD144) | Cdh5 | P55284 | 1 |
| Cadherin-related family member 1 (Photoreceptor cadherin) (prCAD) (Protocadherin-21) | Cdhr1 Kiaa1775 Pcdh21 Prcad | Q8VHP6 | 1 |
| Cadherin-related family member 5 (Mu-protocadherin) (Mucin and cadherin-like protein) | Cdhr5 Mucdhl Mupcdh | Q8VHF2 | 1 |
| Calcineurin binding protein 1, isoform CRA_a (Protein Cabin1) | Cabin1 mCG_117500 | G3X8Q1 | 1 |
| Calcipressin-1 (Down syndrome critical region protein 1 homolog) (Myocyte-enriched calcineurin-interacting protein 1) (MCIP1) (Regulator of calcineurin 1) | Rcan1 Dscr1 | Q9JHG6 | 1 |
| Calcipressin-2 (Calcineurin inhibitory protein ZAKI-4) (Down syndrome candidate region 1-like protein 1) (Myocyte-enriched calcineurin-interacting protein 2) (MCIP2) (Regulator of calcineurin 2) | Rcan2 Dscr1l1 Zaki4 | Q9JHG2 | 1 |
| Calcium and integrin binding family member 3 (Protein Cib3) | Cib3 | Q0P523 | 1 |
| Calcium homeostasis endoplasmic reticulum protein (SR-related CTD-associated factor 6) | Cherp Scaf6 | Q8CGZ0 | 1 |
| Calcium release-activated calcium channel protein 1 (Protein orai-1) (Transmembrane protein 142A) | Orai1 Cracm1 Tmem142a | Q8BWG9 | 1 |
| Calcium signal-modulating cyclophilin ligand (CAML) | Camlg Caml | P49070 | 1 |
| Calcium uniporter protein, mitochondrial (Coiled-coil domain-containing protein 109A) | Mcu Ccdc109a | Q3UMR5 | 1 |