| Dymeclin (Dyggve-Melchior-Clausen syndrome protein) | DYM | Q7RTS9 | 1 |
| Dynactin subunit 2 (50 kDa dynein-associated polypeptide) (Dynactin complex 50 kDa subunit) (DCTN-50) (p50 dynamitin) | DCTN2 DCTN50 | Q86YN2 | 1 |
| Dynactin subunit 2 (Fragment) | DCTN2 | H0YHL1 | 1 |
| Dynactin subunit 5 | DCTN5 | H3BUD2 | 1 |
| Dynactin subunit 5 (Dynactin subunit p25) | DCTN5 | H3BN51 | 1 |
| Dynamin-1 (Fragment) | DNM1 | H7C5U0 | 1 |
| Dynamin-1-like protein (cDNA FLJ59840, highly similar to Dynamin-1-like protein (EC 3.6.5.5)) | DNM1L | B4DDQ3 | 1 |
| Dynamin-1-like protein (cDNA FLJ59948, highly similar to Dynamin-1-like protein (EC 3.6.5.5)) | DNM1L | B4DPZ9 | 1 |
| Dynamin-1-like protein (EC 3.6.5.5) (Dnm1p/Vps1p-like protein) (DVLP) (Dynamin family member proline-rich carboxyl-terminal domain less) (Dymple) (Dynamin-like protein) (Dynamin-like protein 4) (Dynamin-like protein IV) (HdynIV) (Dynamin-related protein 1) | DNM1L DLP1 DRP1 | Q59GN9 | 1 |
| Dynamin-1-like protein (Fragment) | DNM1L | F8W1W3 | 1 |
| Dynamin-1-like protein (Fragment) | DNM1L | H0YHY4 | 1 |
| Dynamin-2 (EC 3.6.5.5) | DNM2 DYN2 | A8K1B6 | 1 |
| Dynamin-like 120 kDa protein, mitochondrial (Fragment) | OPA1 | H7C3G2 | 1 |
| Dynein assembly factor 1, axonemal (Leucine-rich repeat-containing protein 50) | DNAAF1 LRRC50 | Q8NEP3 | 1 |
| Dynein assembly factor 5, axonemal | DNAAF5 | E9PGY2 | 1 |
| Dynein assembly factor 5, axonemal (Fragment) | DNAAF5 | H0Y650 | 1 |
| Dynein heavy chain 1, axonemal (Fragment) | DNAH1 | H7C563 | 1 |
| Dynein heavy chain 12, axonemal (Axonemal beta dynein heavy chain 12) (Axonemal dynein heavy chain 12-like protein) (Axonemal dynein heavy chain 7-like protein) (Ciliary dynein heavy chain 12) (Dynein heavy chain 7-like, axonemal) (Dynein heavy chain domain-containing protein 2) | DNAH12 DHC3 DLP12 DNAH12L DNAH7L DNAHC3 DNHD2 HDHC3 HL19 | Q6ZTR8 | 1 |
| Dynein heavy chain 14, axonemal (HCG22803, isoform CRA_g) | DNAH14 hCG_22803 | M9MMK7 | 1 |
| Dynein heavy chain 17, axonemal | DNAH17 | K7EK91 | 1 |
| Dynein heavy chain 2, axonemal (Fragment) | DNAH2 | I3L520 | 1 |
| Dynein heavy chain 7, axonemal (Fragment) | DNAH7 | H7C362 | 1 |
| Dynein intermediate chain 2, axonemal (Axonemal dynein intermediate chain 2) | DNAI2 | Q9GZS0 | 1 |
| Dynein light chain 1, axonemal | DNAL1 C14orf168 | Q4LDG9 | 1 |
| Dynein regulatory complex subunit 3 (Leucine-rich repeat-containing protein 48) | DRC3 LRRC48 | Q9H069 | 1 |
| Dynein, axonemal, heavy chain 11 | DNAH11 | C0JYZ1 | 1 |
| Dysbindin (Biogenesis of lysosome-related organelles complex 1 subunit 8) (BLOC-1 subunit 8) (Dysbindin-1) (Dystrobrevin-binding protein 1) (Hermansky-Pudlak syndrome 7 protein) (HPS7 protein) | DTNBP1 BLOC1S8 My031 | Q96EV8 | 1 |
| Dysbindin domain-containing protein 1 | DBNDD1 | H3BLZ2 | 1 |
| Dyslexia-associated protein KIAA0319 | KIAA0319 | Q5VV43 | 1 |
| Dyslexia-associated protein KIAA0319-like protein (Fragment) | KIAA0319L | E7EN73 | 1 |
| Dystonin | DST | F8W9J4 | 1 |
| Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein) | DST BP230 BP240 BPAG1 DMH DT KIAA0728 | O94833 | 1 |
| Dystonin (Fragment) | DST | H0YC82 | 1 |
| Dystonin (Fragment) | DST | E7ESK0 | 1 |
| Dystonin (Fragment) | DST | H0YC65 | 1 |
| Dystonin (Fragment) | DST | Q5T0V7 | 1 |
| Dystrobrevin | DTNB | E9PEY4 | 1 |
| Dystrophia myotonica WD repeat-containing protein (Dystrophia myotonica-containing WD repeat motif protein) (Protein 59) (Protein DMR-N9) | DMWD DM9 | Q09019 | 1 |
| Dystrophin | DMD | A0A075B6G3 | 1 |
| Dystrophin | DMD | F8VX32 | 1 |
| Dystrophin | DMD | E7ESB2 | 1 |
| Dystrophin-related protein 2 (DRP-2) | DRP2 | Q13474 | 1 |
| Dystrotelin | DYTN | A2CJ06 | 1 |
| E-cadherin | 0 | Q9UII7 | 1 |
| E3 SUMO-protein ligase EGR2 (EC 6.3.2.-) (AT591) (Early growth response protein 2) (EGR-2) (Zinc finger protein Krox-20) | EGR2 KROX20 | P11161 | 1 |
| E3 SUMO-protein ligase KIAA1586 (EC 6.3.2.-) | KIAA1586 | Q9HCI6 | 1 |
| E3 SUMO-protein ligase PIAS2 (EC 6.3.2.-) (Androgen receptor-interacting protein 3) (ARIP3) (DAB2-interacting protein) (DIP) (Msx-interacting zinc finger protein) (Miz1) (PIAS-NY protein) (Protein inhibitor of activated STAT x) (Protein inhibitor of activated STAT2) | PIAS2 PIASX | O75928 | 1 |
| E3 SUMO-protein ligase PIAS3 (EC 6.3.2.-) (Protein inhibitor of activated STAT protein 3) | PIAS3 | Q9Y6X2 | 1 |
| E3 SUMO-protein ligase ZNF451 (EC 6.3.2.-) (Coactivator for steroid receptors) (Zinc finger protein 451) | ZNF451 COASTER KIAA0576 KIAA1702 | Q9Y4E5 | 1 |
| E3 ubiquitin ligase RNF157 (EC 2.3.2.27) (RING finger protein 157) (RING-type E3 ubiquitin transferase RNF157) | RNF157 KIAA1917 | Q96PX1 | 1 |
| E3 ubiquitin-protein ligase AMFR (EC 2.3.2.27) (Autocrine motility factor receptor) (AMF receptor) (RING finger protein 45) (RING-type E3 ubiquitin transferase AMFR) (gp78) | AMFR RNF45 | Q9UKV5 | 1 |
| E3 ubiquitin-protein ligase ARIH1 (Fragment) | ARIH1 | H3BNB9 | 1 |
| E3 ubiquitin-protein ligase ARIH1 (Fragment) | ARIH1 | A0A087WT96 | 1 |
| E3 ubiquitin-protein ligase BRE1B (Fragment) | RNF40 | H3BQ99 | 1 |
| E3 ubiquitin-protein ligase CBL-B (EC 2.3.2.27) (Casitas B-lineage lymphoma proto-oncogene b) (RING finger protein 56) (RING-type E3 ubiquitin transferase CBL-B) (SH3-binding protein CBL-B) (Signal transduction protein CBL-B) | CBLB RNF56 Nbla00127 | Q13191 | 1 |
| E3 ubiquitin-protein ligase CHFR (Fragment) | CHFR | F5H5P5 | 1 |
| E3 ubiquitin-protein ligase CHIP (Fragment) | STUB1 | H3BUD0 | 1 |
| E3 ubiquitin-protein ligase DZIP3 (EC 2.3.2.27) (DAZ-interacting protein 3) (RING-type E3 ubiquitin transferase DZIP3) (RNA-binding ubiquitin ligase of 138 kDa) (hRUL138) | DZIP3 KIAA0675 | Q86Y13 | 1 |
| E3 ubiquitin-protein ligase HECTD1 (Fragment) | HECTD1 | G3V4V5 | 1 |
| E3 ubiquitin-protein ligase HUWE1 (Fragment) | HUWE1 | H0Y659 | 1 |
| E3 ubiquitin-protein ligase Jade-2 (EC 2.3.2.27) (Jade family PHD finger protein 2) (PHD finger protein 15) | JADE2 KIAA0239 PHF15 | Q9NQC1 | 1 |
| E3 ubiquitin-protein ligase MARCH6 (EC 2.3.2.27) (Doa10 homolog) (Membrane-associated RING finger protein 6) (Membrane-associated RING-CH protein VI) (MARCH-VI) (Protein TEB-4) (RING finger protein 176) (RING-type E3 ubiquitin transferase MARCH6) | MARCH6 KIAA0597 RNF176 TEB4 | O60337 | 1 |
| E3 ubiquitin-protein ligase MARCH7 | MARCH7 | F5H6W4 | 1 |
| E3 ubiquitin-protein ligase Mdm2 | MDM2 | F5GWH7 | 1 |
| E3 ubiquitin-protein ligase Mdm2 (EC 2.3.2.27) (Double minute 2 protein) (Hdm2) (Oncoprotein Mdm2) (RING-type E3 ubiquitin transferase Mdm2) (p53-binding protein Mdm2) | MDM2 | Q00987 | 1 |
| E3 ubiquitin-protein ligase MGRN1 (Fragment) | MGRN1 | K7EPJ5 | 1 |
| E3 ubiquitin-protein ligase MIB2 (EC 2.3.2.27) (Mind bomb homolog 2) (Novel zinc finger protein) (Novelzin) (Putative NF-kappa-B-activating protein 002N) (RING-type E3 ubiquitin transferase MIB2) (Skeletrophin) (Zinc finger ZZ type with ankyrin repeat domain protein 1) | MIB2 SKD ZZANK1 | Q96AX9 | 1 |
| E3 ubiquitin-protein ligase Midline-1 (Fragment) | MID1 | C9JZJ7 | 1 |
| E3 ubiquitin-protein ligase NEURL1 (EC 2.3.2.27) (Neuralized-like protein 1A) (h-neu) (h-neuralized 1) (RING finger protein 67) (RING-type E3 ubiquitin transferase NEURL1) | NEURL1 NEURL NEURL1A RNF67 | O76050 | 1 |
| E3 ubiquitin-protein ligase NEURL3 (EC 2.3.2.27) (Lung-inducible neuralized-related C3CH4 RING domain protein) (Neuralized-like protein 3) (RING-type E3 ubiquitin transferase NEURL3) | NEURL3 LINCR | Q96EH8 | 1 |
| E3 ubiquitin-protein ligase pellino homolog 2 (Fragment) | PELI2 | H0YNF4 | 1 |
| E3 ubiquitin-protein ligase PPP1R11 (PPP1R11 protein) | PPP1R11 | Q5SRK2 | 1 |
| E3 ubiquitin-protein ligase RAD18 (EC 2.3.2.27) (Postreplication repair protein RAD18) (hHR18) (hRAD18) (RING finger protein 73) (RING-type E3 ubiquitin transferase RAD18) | RAD18 RNF73 | Q9NS91 | 1 |
| E3 ubiquitin-protein ligase RBBP6 (Fragment) | RBBP6 | H3BUN0 | 1 |
| E3 ubiquitin-protein ligase RFWD2 (EC 2.3.2.27) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) (RING finger and WD repeat domain protein 2) (RING finger protein 200) (RING-type E3 ubiquitin transferase RFWD2) | RFWD2 COP1 RNF200 | Q8NHY2 | 1 |
| E3 ubiquitin-protein ligase RFWD3 (EC 2.3.2.27) (RING finger and WD repeat domain-containing protein 3) (RING finger protein 201) | RFWD3 RNF201 | Q6PCD5 | 1 |
| E3 ubiquitin-protein ligase RING2 (Fragment) | RNF2 | X6RFN3 | 1 |
| E3 ubiquitin-protein ligase RNF115 (EC 2.3.2.27) (RING finger protein 115) (RING-type E3 ubiquitin transferase RNF115) (Rabring 7) (Zinc finger protein 364) | RNF115 ZNF364 | Q9Y4L5 | 1 |
| E3 ubiquitin-protein ligase RNF123 | RNF123 | C9JS59 | 1 |
| E3 ubiquitin-protein ligase RNF125 (EC 2.3.2.27) (RING finger protein 125) (T-cell RING activation protein 1) (TRAC-1) | RNF125 | Q96EQ8 | 1 |
| E3 ubiquitin-protein ligase RNF128 (EC 2.3.2.27) (Gene related to anergy in lymphocytes protein) (GRAIL) (RING finger protein 128) (RING-type E3 ubiquitin transferase RNF128) | RNF128 | Q8TEB7 | 1 |
| E3 ubiquitin-protein ligase RNF13 (Fragment) | RNF13 | C9J8T4 | 1 |
| E3 ubiquitin-protein ligase RNF130 | RNF130 | E5RI87 | 1 |
| E3 ubiquitin-protein ligase RNF135 (EC 2.3.2.27) (RIG-I E3 ubiquitin ligase) (REUL) (RING finger protein 135) (RING-type E3 ubiquitin transferase RNF135) (Riplet) | RNF135 L13 | Q8IUD6 | 1 |
| E3 ubiquitin-protein ligase RNF14 (Fragment) | RNF14 | E7EP22 | 1 |
| E3 ubiquitin-protein ligase RNF168 (hRNF168) (EC 2.3.2.27) (RING finger protein 168) (RING-type E3 ubiquitin transferase RNF168) | RNF168 | Q8IYW5 | 1 |
| E3 ubiquitin-protein ligase RNF170 (Fragment) | RNF170 | E9PP55 | 1 |
| E3 ubiquitin-protein ligase RNF181 (EC 2.3.2.27) (RING finger protein 181) (RING-type E3 ubiquitin transferase RNF181) | RNF181 HSPC238 | Q9P0P0 | 1 |
| E3 ubiquitin-protein ligase RNF19A (EC 2.3.2.-) (Double ring-finger protein) (Dorfin) (RING finger protein 19A) (p38) | RNF19A RNF19 | Q9NV58 | 1 |
| E3 ubiquitin-protein ligase RNF19B (EC 2.3.2.-) (IBR domain-containing protein 3) (Natural killer lytic-associated molecule) (RING finger protein 19B) | RNF19B IBRDC3 NKLAM | Q6ZMZ0 | 1 |
| E3 ubiquitin-protein ligase RNF213 | RNF213 | A0A0A0MTR7 | 1 |
| E3 ubiquitin-protein ligase RNF216 (EC 2.3.2.27) (RING finger protein 216) (RING-type E3 ubiquitin transferase RNF216) (Triad domain-containing protein 3) (Ubiquitin-conjugating enzyme 7-interacting protein 1) (Zinc finger protein inhibiting NF-kappa-B) | RNF216 TRIAD3 UBCE7IP1 ZIN | Q9NWF9 | 1 |
| E3 ubiquitin-protein ligase RNF220 (EC 2.3.2.27) (RING finger protein 220) (RING-type E3 ubiquitin transferase RNF220) | RNF220 C1orf164 | Q5VTB9 | 1 |
| E3 ubiquitin-protein ligase RNF4 | RNF4 | D6R9E0 | 1 |
| E3 ubiquitin-protein ligase RNF5 (EC 2.3.2.27) (Protein G16) (RING finger protein 5) (RING-type E3 ubiquitin transferase RNF5) (Ram1 homolog) (HsRma1) | RNF5 G16 NG2 RMA1 | Q99942 | 1 |
| E3 ubiquitin-protein ligase RNF8 (hRNF8) (EC 2.3.2.27) (RING finger protein 8) (RING-type E3 ubiquitin transferase RNF8) | RNF8 KIAA0646 | O76064 | 1 |
| E3 ubiquitin-protein ligase RNFT1 (EC 2.3.2.27) (Protein PTD016) (RING finger and transmembrane domain-containing protein 1) | RNFT1 PTD016 | Q5M7Z0 | 1 |
| E3 ubiquitin-protein ligase synoviolin (EC 2.3.2.27) (RING-type E3 ubiquitin transferase synoviolin) (Synovial apoptosis inhibitor 1) | SYVN1 HRD1 KIAA1810 | Q86TM6 | 1 |
| E3 ubiquitin-protein ligase Topors (EC 2.3.2.27) (RING-type E3 ubiquitin transferase Topors) (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-binding protein 3) (p53BP3) | TOPORS LUN TP53BPL | Q9NS56 | 1 |
| E3 ubiquitin-protein ligase TRAF7 | TRAF7 | H3BUP4 | 1 |