| HLA class I histocompatibility antigen, B-44 alpha chain (Bw-44) (MHC class I antigen B*44) | HLA-B HLAB | P30481 | 54 |
| Isochorismatase domain-containing protein 2 | ISOC2 | Q96AB3 | 54 |
| Leucine-rich alpha-2-glycoprotein (LRG) | LRG1 LRG | P02750 | 54 |
| Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171) | L1CAM CAML1 MIC5 | P32004 | 54 |
| Neuropilin-2 (Vascular endothelial cell growth factor 165 receptor 2) | NRP2 VEGF165R2 | O60462 | 54 |
| Peptidyl-tRNA hydrolase 2, mitochondrial (PTH 2) (EC 3.1.1.29) (Bcl-2 inhibitor of transcription 1) | PTRH2 BIT1 PTH2 CGI-147 | Q9Y3E5 | 54 |
| Periplakin (190 kDa paraneoplastic pemphigus antigen) (195 kDa cornified envelope precursor protein) | PPL KIAA0568 | O60437 | 54 |
| Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase (EC 2.1.1.-) (Nucleolar protein 1) (Nucleolar protein 2 homolog) (Proliferating-cell nucleolar antigen p120) (Proliferation-associated nucleolar protein p120) | NOP2 NOL1 NSUN1 | P46087 | 54 |
| Prostate stem cell antigen | PSCA UNQ206/PRO232 | O43653 | 54 |
| Putative elongation factor 1-alpha-like 3 (EF-1-alpha-like 3) (Eukaryotic elongation factor 1 A-like 3) (eEF1A-like 3) (Eukaryotic translation elongation factor 1 alpha-1 pseudogene 5) | EEF1A1P5 EEF1AL3 | Q5VTE0 | 54 |
| Serpin B5 (Maspin) (Peptidase inhibitor 5) (PI-5) | SERPINB5 PI5 | P36952 | 54 |
| Suppressor of tumorigenicity 14 protein (EC 3.4.21.109) (Matriptase) (Membrane-type serine protease 1) (MT-SP1) (Prostamin) (Serine protease 14) (Serine protease TADG-15) (Tumor-associated differentially-expressed gene 15 protein) | ST14 PRSS14 SNC19 TADG15 | Q9Y5Y6 | 54 |
| Talin-2 | TLN2 KIAA0320 | Q9Y4G6 | 54 |
| Thyroid hormone receptor-associated protein 3 (Thyroid hormone receptor-associated protein complex 150 kDa component) (Trap150) | THRAP3 TRAP150 | Q9Y2W1 | 54 |
| TIP41-like protein (Putative MAPK-activating protein PM10) (Type 2A-interacting protein) (TIP) | TIPRL | O75663 | 54 |
| Transformer-2 protein homolog beta (TRA-2 beta) (TRA2-beta) (hTRA2-beta) (Splicing factor, arginine/serine-rich 10) (Transformer-2 protein homolog B) | TRA2B SFRS10 | P62995 | 54 |
| Transmembrane protein 59 (Liver membrane-bound protein) | TMEM59 C1orf8 HSPC001 UNQ169/PRO195 | Q9BXS4 | 54 |
| Tyrosine-protein phosphatase non-receptor type 1 (EC 3.1.3.48) (Protein-tyrosine phosphatase 1B) (PTP-1B) | PTPN1 PTP1B | P18031 | 54 |
| ADP-ribosylation factor-like protein 15 (ADP-ribosylation factor-related protein 2) (ARF-related protein 2) | ARL15 ARFRP2 | Q9NXU5 | 53 |
| Aldehyde dehydrogenase X, mitochondrial (EC 1.2.1.3) (Aldehyde dehydrogenase 5) (Aldehyde dehydrogenase family 1 member B1) | ALDH1B1 ALDH5 ALDHX | P30837 | 53 |
| Aldo-keto reductase family 1 member C1 (EC 1.1.1.-) (20-alpha-hydroxysteroid dehydrogenase) (20-alpha-HSD) (EC 1.1.1.149) (Chlordecone reductase homolog HAKRC) (Dihydrodiol dehydrogenase 1/2) (DD1/DD2) (High-affinity hepatic bile acid-binding protein) (HBAB) (Indanol dehydrogenase) (EC 1.1.1.112) (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase) (EC 1.3.1.20) | AKR1C1 DDH DDH1 | Q04828 | 53 |
| ATP-binding cassette sub-family B member 6, mitochondrial (Mitochondrial ABC transporter 3) (Mt-ABC transporter 3) (P-glycoprotein-related protein) (Ubiquitously-expressed mammalian ABC half transporter) | ABCB6 MTABC3 PRP UMAT | Q9NP58 | 53 |
| Biglycan (Bone/cartilage proteoglycan I) (PG-S1) | BGN SLRR1A | P21810 | 53 |
| Carboxypeptidase N subunit 2 (Carboxypeptidase N 83 kDa chain) (Carboxypeptidase N large subunit) (Carboxypeptidase N polypeptide 2) (Carboxypeptidase N regulatory subunit) | CPN2 ACBP | P22792 | 53 |
| Casein kinase I isoform gamma-3 (CKI-gamma 3) (EC 2.7.11.1) | CSNK1G3 | Q9Y6M4 | 53 |
| Clathrin interactor 1 (Clathrin-interacting protein localized in the trans-Golgi region) (Clint) (Enthoprotin) (Epsin-4) (Epsin-related protein) (EpsinR) | CLINT1 ENTH EPN4 EPNR KIAA0171 | Q14677 | 53 |
| Complement C1q subcomponent subunit A | C1QA | P02745 | 53 |
| Delta-aminolevulinic acid dehydratase (ALADH) (EC 4.2.1.24) (Porphobilinogen synthase) | ALAD | P13716 | 53 |
| Developmentally-regulated GTP-binding protein 2 (DRG-2) | DRG2 | P55039 | 53 |
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial (EC 2.3.1.12) (70 kDa mitochondrial autoantigen of primary biliary cirrhosis) (PBC) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (M2 antigen complex 70 kDa subunit) (Pyruvate dehydrogenase complex component E2) (PDC-E2) (PDCE2) | DLAT DLTA | P10515 | 53 |
| Enhancer of mRNA-decapping protein 4 (Autoantigen Ge-1) (Autoantigen RCD-8) (Human enhancer of decapping large subunit) (Hedls) | EDC4 HEDLS | Q6P2E9 | 53 |
| Exosome complex component RRP40 (Exosome component 3) (Ribosomal RNA-processing protein 40) (p10) | EXOSC3 RRP40 CGI-102 | Q9NQT5 | 53 |
| Golgi resident protein GCP60 (Acyl-CoA-binding domain-containing protein 3) (Golgi complex-associated protein 1) (GOCAP1) (Golgi phosphoprotein 1) (GOLPH1) (PBR- and PKA-associated protein 7) (Peripheral benzodiazepine receptor-associated protein PAP7) [Cleaved into: Golgi resident protein GCP60, N-terminally processed] | ACBD3 GCP60 GOCAP1 GOLPH1 | Q9H3P7 | 53 |
| Huntingtin (Huntington disease protein) (HD protein) | HTT HD IT15 | P42858 | 53 |
| Hyaluronan-binding protein 2 (EC 3.4.21.-) (Factor VII-activating protease) (Factor seven-activating protease) (FSAP) (Hepatocyte growth factor activator-like protein) (Plasma hyaluronan-binding protein) [Cleaved into: Hyaluronan-binding protein 2 50 kDa heavy chain; Hyaluronan-binding protein 2 50 kDa heavy chain alternate form; Hyaluronan-binding protein 2 27 kDa light chain; Hyaluronan-binding protein 2 27 kDa light chain alternate form] | HABP2 HGFAL PHBP | Q14520 | 53 |
| Phosphomannomutase 2 (PMM 2) (EC 5.4.2.8) | PMM2 | O15305 | 53 |
| Polyubiquitin-C [Cleaved into: Ubiquitin] | UBC | P0CG48 | 53 |
| Protein FAM98A | FAM98A | Q8NCA5 | 53 |
| Ribosomal protein S6 kinase alpha-1 (S6K-alpha-1) (EC 2.7.11.1) (90 kDa ribosomal protein S6 kinase 1) (p90-RSK 1) (p90RSK1) (p90S6K) (MAP kinase-activated protein kinase 1a) (MAPK-activated protein kinase 1a) (MAPKAP kinase 1a) (MAPKAPK-1a) (Ribosomal S6 kinase 1) (RSK-1) | RPS6KA1 MAPKAPK1A RSK1 | Q15418 | 53 |
| Semaphorin-3C (Semaphorin-E) (Sema E) | SEMA3C SEMAE | Q99985 | 53 |
| Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform (PP2A B subunit isoform B'-epsilon) (PP2A B subunit isoform B56-epsilon) (PP2A B subunit isoform PR61-epsilon) (PP2A B subunit isoform R5-epsilon) | PPP2R5E | Q16537 | 53 |
| Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform (PP2A-beta) (EC 3.1.3.16) | PPP2CB | P62714 | 53 |
| Signal recognition particle 54 kDa protein (SRP54) | SRP54 | P61011 | 53 |
| Synaptotagmin-1 (Synaptotagmin I) (SytI) (p65) | SYT1 SVP65 SYT | P21579 | 53 |
| Tyrosine-protein phosphatase non-receptor type substrate 1 (SHP substrate 1) (SHPS-1) (Brain Ig-like molecule with tyrosine-based activation motifs) (Bit) (CD172 antigen-like family member A) (Inhibitory receptor SHPS-1) (Macrophage fusion receptor) (MyD-1 antigen) (Signal-regulatory protein alpha-1) (Sirp-alpha-1) (Signal-regulatory protein alpha-2) (Sirp-alpha-2) (Signal-regulatory protein alpha-3) (Sirp-alpha-3) (p84) (CD antigen CD172a) | SIRPA BIT MFR MYD1 PTPNS1 SHPS1 SIRP | P78324 | 53 |
| V-type proton ATPase 16 kDa proteolipid subunit (V-ATPase 16 kDa proteolipid subunit) (Vacuolar proton pump 16 kDa proteolipid subunit) | ATP6V0C ATP6C ATP6L ATPL | P27449 | 53 |
| Vacuolar protein sorting-associated protein 16 homolog (hVPS16) | VPS16 | Q9H269 | 53 |
| 5'-3' exoribonuclease 2 (EC 3.1.13.-) (DHM1-like protein) (DHP protein) | XRN2 | Q9H0D6 | 52 |
| Actin, gamma-enteric smooth muscle (Alpha-actin-3) (Gamma-2-actin) (Smooth muscle gamma-actin) | ACTG2 ACTA3 ACTL3 ACTSG | P63267 | 52 |
| Alpha-1-acid glycoprotein 2 (AGP 2) (Orosomucoid-2) (OMD 2) | ORM2 AGP2 | P19652 | 52 |
| Cathepsin G (CG) (EC 3.4.21.20) | CTSG | P08311 | 52 |
| Cullin-4A (CUL-4A) | CUL4A | Q13619 | 52 |
| Cytochrome b-c1 complex subunit Rieske, mitochondrial (EC 1.10.2.2) (Complex III subunit 5) (Cytochrome b-c1 complex subunit 5) (Rieske iron-sulfur protein) (RISP) (Ubiquinol-cytochrome c reductase iron-sulfur subunit) [Cleaved into: Cytochrome b-c1 complex subunit 11 (Complex III subunit IX) (Ubiquinol-cytochrome c reductase 8 kDa protein)] | UQCRFS1 | P47985 | 52 |
| Cytochrome c1, heme protein, mitochondrial (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4) (Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit) (Cytochrome c-1) | CYC1 | P08574 | 52 |
| DnaJ homolog subfamily C member 3 (Endoplasmic reticulum DNA J domain-containing protein 6) (ER-resident protein ERdj6) (ERdj6) (Interferon-induced, double-stranded RNA-activated protein kinase inhibitor) (Protein kinase inhibitor of 58 kDa) (Protein kinase inhibitor p58) | DNAJC3 P58IPK PRKRI | Q13217 | 52 |
| Far upstream element-binding protein 1 (FBP) (FUSE-binding protein 1) (DNA helicase V) (hDH V) | FUBP1 | Q96AE4 | 52 |
| Glutaminase kidney isoform, mitochondrial (GLS) (EC 3.5.1.2) (K-glutaminase) (L-glutamine amidohydrolase) | GLS GLS1 KIAA0838 | O94925 | 52 |
| H/ACA ribonucleoprotein complex subunit 1 (Nucleolar protein family A member 1) (snoRNP protein GAR1) | GAR1 NOLA1 | Q9NY12 | 52 |
| Host cell factor 1 (HCF) (HCF-1) (C1 factor) (CFF) (VCAF) (VP16 accessory protein) [Cleaved into: HCF N-terminal chain 1; HCF N-terminal chain 2; HCF N-terminal chain 3; HCF N-terminal chain 4; HCF N-terminal chain 5; HCF N-terminal chain 6; HCF C-terminal chain 1; HCF C-terminal chain 2; HCF C-terminal chain 3; HCF C-terminal chain 4; HCF C-terminal chain 5; HCF C-terminal chain 6] | HCFC1 HCF1 HFC1 | P51610 | 52 |
| Immunoglobulin kappa variable 4-1 (Ig kappa chain V-IV region B17) (Ig kappa chain V-IV region JI) (Ig kappa chain V-IV region Len) (Ig kappa chain V-IV region STH) | IGKV4-1 | P06312 | 52 |
| Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2 mRNA-binding protein 2) (IMP-2) (Hepatocellular carcinoma autoantigen p62) (IGF-II mRNA-binding protein 2) (VICKZ family member 2) | IGF2BP2 IMP2 VICKZ2 | Q9Y6M1 | 52 |
| Kallistatin (Kallikrein inhibitor) (Peptidase inhibitor 4) (PI-4) (Serpin A4) | SERPINA4 KST PI4 | P29622 | 52 |
| Keratin, type I cytoskeletal 15 (Cytokeratin-15) (CK-15) (Keratin-15) (K15) | KRT15 KRTB | P19012 | 52 |
| Phosphoenolpyruvate carboxykinase [GTP], mitochondrial (PEPCK-M) (EC 4.1.1.32) | PCK2 PEPCK2 | Q16822 | 52 |
| Prostaglandin E synthase 2 (Membrane-associated prostaglandin E synthase-2) (mPGE synthase-2) (Microsomal prostaglandin E synthase 2) (mPGES-2) (Prostaglandin-H(2) E-isomerase) (EC 5.3.99.3) [Cleaved into: Prostaglandin E synthase 2 truncated form] | PTGES2 C9orf15 PGES2 | Q9H7Z7 | 52 |
| Prostatic acid phosphatase (PAP) (EC 3.1.3.2) (5'-nucleotidase) (5'-NT) (EC 3.1.3.5) (Ecto-5'-nucleotidase) (Thiamine monophosphatase) (TMPase) [Cleaved into: PAPf39] | ACPP | P15309 | 52 |
| Ras-related protein Rab-25 (CATX-8) | RAB25 CATX8 | P57735 | 52 |
| Serine/threonine-protein kinase MARK2 (EC 2.7.11.1) (EC 2.7.11.26) (ELKL motif kinase 1) (EMK-1) (MAP/microtubule affinity-regulating kinase 2) (PAR1 homolog) (PAR1 homolog b) (Par-1b) (Par1b) | MARK2 EMK1 | Q7KZI7 | 52 |
| Splicing factor 3B subunit 5 (SF3b5) (Pre-mRNA-splicing factor SF3b 10 kDa subunit) | SF3B5 SF3B10 | Q9BWJ5 | 52 |
| Sulfide:quinone oxidoreductase, mitochondrial (SQOR) (EC 1.8.5.-) | SQRDL CGI-44 | Q9Y6N5 | 52 |
| THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1) (Aly/REF export factor) (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF) | ALYREF ALY BEF THOC4 | Q86V81 | 52 |
| U6 snRNA-associated Sm-like protein LSm5 | LSM5 | Q9Y4Y9 | 52 |
| U6 snRNA-associated Sm-like protein LSm6 | LSM6 | P62312 | 52 |
| Ubiquitin domain-containing protein 1 | UBTD1 | Q9HAC8 | 52 |
| Uromodulin (Tamm-Horsfall urinary glycoprotein) (THP) [Cleaved into: Uromodulin, secreted form] | UMOD | P07911 | 52 |
| 60S ribosomal protein L36a (60S ribosomal protein L44) (Cell growth-inhibiting gene 15 protein) (Cell migration-inducing gene 6 protein) (Large ribosomal subunit protein eL42) | RPL36A RPL44 GIG15 MIG6 | P83881 | 51 |
| Aspartyl/asparaginyl beta-hydroxylase (EC 1.14.11.16) (Aspartate beta-hydroxylase) (ASP beta-hydroxylase) (Peptide-aspartate beta-dioxygenase) | ASPH BAH | Q12797 | 51 |
| CCR4-NOT transcription complex subunit 9 (Cell differentiation protein RQCD1 homolog) (Rcd-1) | CNOT9 RCD1 RQCD1 | Q92600 | 51 |
| Collagen alpha-1(VII) chain (Long-chain collagen) (LC collagen) | COL7A1 | Q02388 | 51 |
| Diablo homolog, mitochondrial (Direct IAP-binding protein with low pI) (Second mitochondria-derived activator of caspase) (Smac) | DIABLO SMAC | Q9NR28 | 51 |
| Dynein assembly factor 5, axonemal (HEAT repeat-containing protein 2) | DNAAF5 HEATR2 | Q86Y56 | 51 |
| Dyslexia-associated protein KIAA0319-like protein (Adeno-associated virus receptor) (AAVR) | KIAA0319L AAVR KIAA1837 PP791 | Q8IZA0 | 51 |
| Endophilin-B1 (Bax-interacting factor 1) (Bif-1) (SH3 domain-containing GRB2-like protein B1) | SH3GLB1 KIAA0491 CGI-61 | Q9Y371 | 51 |
| Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses protein 1) (Putative tumor suppressor protein EXT1) | EXT1 | Q16394 | 51 |
| Ficolin-3 (Collagen/fibrinogen domain-containing lectin 3 p35) (Collagen/fibrinogen domain-containing protein 3) (Hakata antigen) | FCN3 FCNH HAKA1 | O75636 | 51 |
| Glutamyl aminopeptidase (EAP) (EC 3.4.11.7) (Aminopeptidase A) (AP-A) (Differentiation antigen gp160) (CD antigen CD249) | ENPEP | Q07075 | 51 |
| Glycerol-3-phosphate phosphatase (G3PP) (EC 3.1.3.21) (Aspartate-based ubiquitous Mg(2+)-dependent phosphatase) (AUM) (EC 3.1.3.48) (Phosphoglycolate phosphatase) (PGP) | PGP | A6NDG6 | 51 |
| Golgi phosphoprotein 3 (Coat protein GPP34) (Mitochondrial DNA absence factor) (MIDAS) | GOLPH3 GPP34 | Q9H4A6 | 51 |
| Inositol monophosphatase 3 (IMP 3) (IMPase 3) (EC 3.1.3.25) (EC 3.1.3.7) (Golgi 3-prime phosphoadenosine 5-prime phosphate 3-prime phosphatase) (Golgi-resident PAP phosphatase) (gPAPP) (Inositol monophosphatase domain-containing protein 1) (Inositol-1(or 4)-monophosphatase 3) (Myo-inositol monophosphatase A3) | IMPAD1 IMPA3 | Q9NX62 | 51 |
| Interferon-induced GTP-binding protein Mx1 (Interferon-induced protein p78) (IFI-78K) (Interferon-regulated resistance GTP-binding protein MxA) (Myxoma resistance protein 1) (Myxovirus resistance protein 1) [Cleaved into: Interferon-induced GTP-binding protein Mx1, N-terminally processed] | MX1 | P20591 | 51 |
| Keratin, type II cytoskeletal 80 (Cytokeratin-80) (CK-80) (Keratin-80) (K80) (Type-II keratin Kb20) | KRT80 KB20 | Q6KB66 | 51 |
| Laminin subunit gamma-2 (Cell-scattering factor 140 kDa subunit) (CSF 140 kDa subunit) (Epiligrin subunit gamma) (Kalinin subunit gamma) (Kalinin/nicein/epiligrin 100 kDa subunit) (Ladsin 140 kDa subunit) (Laminin B2t chain) (Laminin-5 subunit gamma) (Large adhesive scatter factor 140 kDa subunit) (Nicein subunit gamma) | LAMC2 LAMB2T LAMNB2 | Q13753 | 51 |
| Leukosialin (Galactoglycoprotein) (GALGP) (Leukocyte sialoglycoprotein) (Sialophorin) (CD antigen CD43) | SPN CD43 | P16150 | 51 |
| Myosin light chain 6B (Myosin light chain 1 slow-twitch muscle A isoform) (MLC1sa) (Smooth muscle and nonmuscle myosin light chain alkali 6B) | MYL6B MLC1SA | P14649 | 51 |
| Olfactomedin-like protein 3 (HNOEL-iso) (hOLF44) | OLFML3 PSEC0035 PSEC0173 PSEC0244 UNQ663/PRO1294 | Q9NRN5 | 51 |
| Oxidoreductase HTATIP2 (EC 1.1.1.-) (30 kDa HIV-1 TAT-interacting protein) (HIV-1 TAT-interactive protein 2) | HTATIP2 CC3 TIP30 | Q9BUP3 | 51 |
| Peptidyl-prolyl cis-trans isomerase C (PPIase C) (EC 5.2.1.8) (Cyclophilin C) (Rotamase C) | PPIC CYPC | P45877 | 51 |
| Phosphatidylinositide phosphatase SAC1 (EC 3.1.3.-) (Suppressor of actin mutations 1-like protein) | SACM1L KIAA0851 | Q9NTJ5 | 51 |
| Proteasome activator complex subunit 4 (Proteasome activator PA200) | PSME4 KIAA0077 | Q14997 | 51 |
| Protein dopey-2 | DOPEY2 C21orf5 KIAA0933 | Q9Y3R5 | 51 |