| Lysosomal-associated transmembrane protein 4B (Lysosome-associated transmembrane protein 4-beta) | LAPTM4B PSEC0001 | Q86VI4 | 9 |
| Lysosomal-associated transmembrane protein 5 (Lysosomal-associated multitransmembrane protein 5) (Retinoic acid-inducible E3 protein) | LAPTM5 KIAA0085 | Q13571 | 9 |
| Lysosomal-trafficking regulator (Beige homolog) | LYST CHS CHS1 | Q99698 | 9 |
| Major vault protein (Fragment) | MVP | H3BRL2 | 9 |
| MARCKS protein (Fragment) | MARCKS | Q6NVI1 | 9 |
| Mediator of RNA polymerase II transcription subunit 18 (Mediator complex subunit 18) (p28b) | MED18 | Q9BUE0 | 9 |
| Mesoderm development candidate 1 | MESDC1 | Q9H1K6 | 9 |
| Metastasis-associated protein MTA3 | MTA3 KIAA1266 | Q9BTC8 | 9 |
| MICOS complex subunit MIC10 (Mitochondrial inner membrane organizing system protein 1) | MINOS1 C1orf151 MIC10 | Q5TGZ0 | 9 |
| Microfibrillar-associated protein 1 | MFAP1 | P55081 | 9 |
| Mitochondrial 10-formyltetrahydrofolate dehydrogenase (Mitochondrial 10-FTHFDH) (mtFDH) (EC 1.5.1.6) (Aldehyde dehydrogenase family 1 member L2) | ALDH1L2 | Q3SY69 | 9 |
| Mitochondrial import inner membrane translocase subunit Tim8 B (DDP-like protein) (Deafness dystonia protein 2) | TIMM8B DDP2 DDPL TIM8B | Q9Y5J9 | 9 |
| Mitogen-activated protein kinase 8 (MAP kinase 8) (MAPK 8) (EC 2.7.11.24) (JNK-46) (Stress-activated protein kinase 1c) (SAPK1c) (Stress-activated protein kinase JNK1) (c-Jun N-terminal kinase 1) | MAPK8 JNK1 PRKM8 SAPK1 SAPK1C | P45983 | 9 |
| Mitotic spindle assembly checkpoint protein MAD2A (HsMAD2) (Mitotic arrest deficient 2-like protein 1) (MAD2-like protein 1) | MAD2L1 MAD2 | Q13257 | 9 |
| Msx2-interacting protein (SMART/HDAC1-associated repressor protein) (SPEN homolog) | SPEN KIAA0929 MINT SHARP | Q96T58 | 9 |
| Mucolipin-1 (MG-2) (Mucolipidin) | MCOLN1 ML4 MSTP080 | Q9GZU1 | 9 |
| Multifunctional protein ADE2 (Phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase, isoform CRA_b) | PAICS hCG_2027161 | D6RF62 | 9 |
| Myoferlin (Fragment) | MYOF | H0YD14 | 9 |
| Myosin-6 (Myosin heavy chain 6) (Myosin heavy chain, cardiac muscle alpha isoform) (MyHC-alpha) | MYH6 MYHCA | P13533 | 9 |
| Myotubularin-related protein 6 (EC 3.1.3.-) | MTMR6 | Q9Y217 | 9 |
| N-alpha-acetyltransferase 40 (EC 2.3.1.257) (N-acetyltransferase 11) (N-alpha-acetyltransferase D) (NatD) (hNatD) (Protein acetyltransferase 1) | NAA40 NAT11 PATT1 | Q86UY6 | 9 |
| Na(+)/H(+) exchange regulatory cofactor NHE-RF | 0 | B2R6A3 | 9 |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 (Hormone-regulated proliferation-associated protein of 20 kDa) | NDUFAF4 C6orf66 HRPAP20 HSPC125 My013 | Q9P032 | 9 |
| NEDD8 ultimate buster 1 (Negative regulator of ubiquitin-like proteins 1) (Renal carcinoma antigen NY-REN-18) | NUB1 NYREN18 | Q9Y5A7 | 9 |
| Neurensin-2 | NRSN2 C20orf98 | Q9GZP1 | 9 |
| Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1) | PCSK1 NEC1 | P29120 | 9 |
| Neuronal pentraxin-2 (NP2) (Neuronal pentraxin II) (NP-II) | NPTX2 | P47972 | 9 |
| NKG2D ligand 2 (N2DL-2) (NKG2DL2) (ALCAN-alpha) (Retinoic acid early transcript 1H) (UL16-binding protein 2) | ULBP2 N2DL2 RAET1H UNQ463/PRO791 | Q9BZM5 | 9 |
| Nodal modulator 3 (pM5 protein 3) | NOMO3 | P69849 | 9 |
| Noggin | NOG | Q13253 | 9 |
| Nuclear distribution protein nudE-like 1 (Protein Nudel) (Mitosin-associated protein 1) | NDEL1 EOPA MITAP1 NUDEL | Q9GZM8 | 9 |
| Nuclear factor 1 C-type (NF1-C) (Nuclear factor 1/C) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/C) (NF-I/C) (NFI-C) (TGGCA-binding protein) | NFIC NFI | P08651 | 9 |
| Nuclear receptor coactivator 7 (140 kDa estrogen receptor-associated protein) (Estrogen nuclear receptor coactivator 1) | NCOA7 ERAP140 ESNA1 Nbla00052 Nbla10993 | Q8NI08 | 9 |
| Nucleolar protein 14 (Nucleolar complex protein 14) | NOP14 C4orf9 NOL14 RES4-25 | P78316 | 9 |
| Oncostatin-M-specific receptor subunit beta (Interleukin-31 receptor subunit beta) (IL-31 receptor subunit beta) (IL-31R subunit beta) (IL-31R-beta) (IL-31RB) | OSMR OSMRB | Q99650 | 9 |
| Osteopetrosis-associated transmembrane protein 1 (Chloride channel 7 beta subunit) | OSTM1 GL HSPC019 UNQ6098/PRO21201 | Q86WC4 | 9 |
| OTU domain-containing protein 7B (EC 3.4.19.12) (Cellular zinc finger anti-NF-kappa-B protein) (Cezanne) (Zinc finger A20 domain-containing protein 1) (Zinc finger protein Cezanne) | OTUD7B ZA20D1 | Q6GQQ9 | 9 |
| Oxidized low-density lipoprotein receptor 1 (Ox-LDL receptor 1) (C-type lectin domain family 8 member A) (Lectin-like oxidized LDL receptor 1) (LOX-1) (Lectin-like oxLDL receptor 1) (hLOX-1) (Lectin-type oxidized LDL receptor 1) [Cleaved into: Oxidized low-density lipoprotein receptor 1, soluble form] | OLR1 CLEC8A LOX1 | P78380 | 9 |
| Oxysterol-binding protein-related protein 1 (ORP-1) (OSBP-related protein 1) | OSBPL1A ORP1 OSBP8 OSBPL1 OSBPL1B | Q9BXW6 | 9 |
| P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P) | SELP GMRP GRMP | P16109 | 9 |
| Peptidase inhibitor 16 (PI-16) (Cysteine-rich secretory protein 9) (CRISP-9) (PSP94-binding protein) | PI16 CRISP9 PSPBP PSEC0164 UNQ289/PRO328 | Q6UXB8 | 9 |
| Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) | PPIA | F8WE65 | 9 |
| Peptidylprolyl isomerase domain and WD repeat-containing protein 1 (EC 5.2.1.8) (Spliceosome-associated cyclophilin) | PPWD1 KIAA0073 | Q96BP3 | 9 |
| Peroxisomal biogenesis factor 19 (33 kDa housekeeping protein) (Peroxin-19) (Peroxisomal farnesylated protein) | PEX19 HK33 PXF OK/SW-cl.22 | P40855 | 9 |
| PH-interacting protein (PHIP) (IRS-1 PH domain-binding protein) (WD repeat-containing protein 11) | PHIP WDR11 | Q8WWQ0 | 9 |
| PHD finger protein 6 (PHD-like zinc finger protein) | PHF6 CENP-31 KIAA1823 | Q8IWS0 | 9 |
| Phosphatidylinositol glycan anchor biosynthesis class U protein (Cell division cycle protein 91-like 1) (Protein CDC91-like 1) (GPI transamidase component PIG-U) | PIGU CDC91L1 PSEC0205 UNQ3055/PRO9875 | Q9H490 | 9 |
| Phosphoinositide-3-kinase-interacting protein 1 (Kringle domain-containing protein HGFL) | PIK3IP1 HGFL | Q96FE7 | 9 |
| Phytanoyl-CoA dioxygenase domain-containing protein 1 (EC 1.-.-.-) | PHYHD1 | Q5SRE7 | 9 |
| Platelet factor 4 variant (C-X-C motif chemokine 4 variant) (CXCL4L1) (PF4alt) (PF4var1) [Cleaved into: Platelet factor 4 variant(4-74); Platelet factor 4 variant(5-74); Platelet factor 4 variant(6-74)] | PF4V1 CXCL4V1 SCYB4V1 | P10720 | 9 |
| Plexin-B3 | PLXNB3 KIAA1206 PLXN6 | Q9ULL4 | 9 |
| Poly [ADP-ribose] polymerase 10 (PARP-10) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 10) (ARTD10) | PARP10 | Q53GL7 | 9 |
| Polycystin-2 (PC2) (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321) (Transient receptor potential cation channel subfamily P member 2) | PKD2 TRPP2 | Q13563 | 9 |
| Polymerase delta-interacting protein 3 (46 kDa DNA polymerase delta interaction protein) (p46) (S6K1 Aly/REF-like target) (SKAR) | POLDIP3 KIAA1649 PDIP46 | Q9BY77 | 9 |
| Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4) | PBX4 | Q9BYU1 | 9 |
| Pre-mRNA-processing factor 17 (Cell division cycle 40 homolog) (EH-binding protein 3) (Ehb3) (PRP17 homolog) (hPRP17) | CDC40 EHB3 PRP17 PRPF17 | O60508 | 9 |
| Pre-mRNA-splicing factor RBM22 (RNA-binding motif protein 22) (Zinc finger CCCH domain-containing protein 16) | RBM22 ZC3H16 199G4 | Q9NW64 | 9 |
| Pro-neuropeptide Y [Cleaved into: Neuropeptide Y (Neuropeptide tyrosine) (NPY); C-flanking peptide of NPY (CPON)] | NPY | P01303 | 9 |
| Probable helicase with zinc finger domain (EC 3.6.4.-) (Down-regulated in human cancers protein) | HELZ DRHC KIAA0054 | P42694 | 9 |
| Probable methyltransferase TARBP1 (EC 2.1.1.-) (TAR RNA-binding protein 1) (TAR RNA-binding protein of 185 kDa) (TRP-185) | TARBP1 TRM3 TRP185 | Q13395 | 9 |
| Probable palmitoyltransferase ZDHHC1 (EC 2.3.1.225) (DHHC domain-containing cysteine-rich protein 1) (Zinc finger DHHC domain-containing protein 1) (DHHC-1) (Zinc finger protein 377) | ZDHHC1 C16orf1 ZNF377 | Q8WTX9 | 9 |
| Probable RNA-binding protein EIF1AD (Eukaryotic translation initiation factor 1A domain-containing protein) (Haponin) | EIF1AD | Q8N9N8 | 9 |
| Probable threonine--tRNA ligase 2, cytoplasmic (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS) (Threonyl-tRNA synthetase-like protein 2) | TARSL2 | A2RTX5 | 9 |
| Proline-rich nuclear receptor coactivator 1 (Proline-rich protein 2) (Protein B4-2) | PNRC1 PROL2 | Q12796 | 9 |
| Proteasome subunit alpha type (EC 3.4.25.1) | PSMA4 | H0YLS6 | 9 |
| Proteasome subunit alpha type (EC 3.4.25.1) | PSMA6 | G3V3I1 | 9 |
| Proteasome subunit beta type (EC 3.4.25.1) (Fragment) | PSMA4 | H0YKT8 | 9 |
| Protein ABHD12B (EC 3.-.-.-) (Abhydrolase domain-containing protein 12B) (Alpha/beta hydrolase domain-containing protein 12B) | ABHD12B C14orf29 | Q7Z5M8 | 9 |
| Protein ALEX (Alternative gene product encoded by XL-exon) | GNAS GNAS1 | P84996 | 9 |
| Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein) | DR1 | Q01658 | 9 |
| Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1) | AHCTF1 ELYS TMBS62 MSTP108 | Q8WYP5 | 9 |
| Protein FAM207A | FAM207A C21orf70 PRED56 | Q9NSI2 | 9 |
| Protein HEXIM1 (Cardiac lineage protein 1) (Estrogen down-regulated gene 1 protein) (Hexamethylene bis-acetamide-inducible protein 1) (Menage a quatre protein 1) | HEXIM1 CLP1 EDG1 HIS1 MAQ1 | O94992 | 9 |
| Protein HGH1 homolog | HGH1 C8orf30A C8orf30B FAM203A FAM203B | Q9BTY7 | 9 |
| Protein Hikeshi | HIKESHI C11orf73 HSPC138 HSPC179 HSPC248 | Q53FT3 | 9 |
| Protein phosphatase 1H (EC 3.1.3.16) | PPM1H ARHCL1 KIAA1157 URCC2 | Q9ULR3 | 9 |
| Protein phosphatase Slingshot homolog 3 (EC 3.1.3.16) (EC 3.1.3.48) (SSH-like protein 3) (SSH-3L) (hSSH-3L) | SSH3 SSH3L | Q8TE77 | 9 |
| Protein S100-A7A (S100 calcium-binding protein A15) (S100 calcium-binding protein A7-like 1) (S100 calcium-binding protein A7A) | S100A7A S100A15 S100A7L1 | Q86SG5 | 9 |
| Protein sidekick-2 | SDK2 KIAA1514 | Q58EX2 | 9 |
| Protein transport protein Sec31A | SEC31A | D6REX3 | 9 |
| Protein unc-13 homolog B (Munc13-2) (munc13) | UNC13B UNC13 | O14795 | 9 |
| Protein-arginine deiminase type-2 (EC 3.5.3.15) (PAD-H19) (Peptidylarginine deiminase II) (Protein-arginine deiminase type II) | PADI2 KIAA0994 PAD2 PDI2 | Q9Y2J8 | 9 |
| Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2) (Related adhesion focal tyrosine kinase) (RAFTK) | PTK2B FAK2 PYK2 RAFTK | Q14289 | 9 |
| Protocadherin gamma-B5 (PCDH-gamma-B5) | PCDHGB5 | Q9Y5G0 | 9 |
| Protransforming growth factor alpha [Cleaved into: Transforming growth factor alpha (TGF-alpha) (EGF-like TGF) (ETGF) (TGF type 1)] | TGFA | P01135 | 9 |
| Pumilio homolog 1 (HsPUM) (Pumilio-1) | PUM1 KIAA0099 PUMH1 | Q14671 | 9 |
| Putative protein C3P1 | C3P1 | Q6ZMU1 | 9 |
| Putative uncharacterized protein DKFZp686E1899 | DKFZp686E1899 | Q5HYL6 | 9 |
| Putative uncharacterized protein DKFZp686L19235 | DKFZp686L19235 | Q6MZV6 | 9 |
| Putative uncharacterized protein DKFZp686M24218 | DKFZp686M24218 | Q6MZX7 | 9 |
| Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial (PDPr) | PDPR KIAA1990 | Q8NCN5 | 9 |
| Pyruvate kinase PKM (Fragment) | PKM | H3BUW1 | 9 |
| Rab proteins geranylgeranyltransferase component A 2 (Choroideremia-like protein) (Rab escort protein 2) (REP-2) | CHML REP2 | P26374 | 9 |
| RAF proto-oncogene serine/threonine-protein kinase (EC 2.7.11.1) (Proto-oncogene c-RAF) (cRaf) (Raf-1) | RAF1 RAF | P04049 | 9 |
| Ral GTPase-activating protein subunit alpha-1 (GAP-related-interacting partner to E12) (GRIPE) (GTPase-activating Rap/Ran-GAP domain-like 1) (Tuberin-like protein 1) (p240) | RALGAPA1 GARNL1 KIAA0884 TULIP1 | Q6GYQ0 | 9 |
| Ran-binding protein 3 (RanBP3) | RANBP3 | Q9H6Z4 | 9 |
| Ras GTPase-activating protein nGAP (RAS protein activator-like 2) | RASAL2 NGAP | Q9UJF2 | 9 |
| Ras homolog enriched in brain | RHEB | Q6NZ61 | 9 |
| Ras-related protein Rab-19 | RAB19 RAB19B | A4D1S5 | 9 |
| Ras-related protein Rab-7b | RAB7B | Q96AH8 | 9 |