| Collagen alpha-1(VII) chain (Long-chain collagen) (LC collagen) | Col7a1 | Q63870 | 7 |
| Condensin complex subunit 1 (Chromosome condensation-related SMC-associated protein 1) (Chromosome-associated protein D2) (mCAP-D2) (Non-SMC condensin I complex subunit D2) (XCAP-D2 homolog) | Ncapd2 Capd2 Cnap1 Kiaa0159 | Q8K2Z4 | 7 |
| Cordon-bleu protein-like 1 (Cobl-related protein 1) | Cobll1 Coblr1 Kiaa0977 | Q3UMF0 | 7 |
| CTP synthase 2 (EC 6.3.4.2) (CTP synthetase 2) (CTPsH) (UTP--ammonia ligase 2) | Ctps2 | P70303 | 7 |
| CUGBP Elav-like family member 2 (CELF-2) (Bruno-like protein 3) (CUG triplet repeat RNA-binding protein 2) (CUG-BP2) (CUG-BP- and ETR-3-like factor 2) (ELAV-type RNA-binding protein 3) (ETR-3) (mETR-3) (Neuroblastoma apoptosis-related RNA-binding protein) (mNapor) (RNA-binding protein BRUNOL-3) | Celf2 Cugbp2 Napor | Q9Z0H4 | 7 |
| Cullin-4A (CUL-4A) | Cul4a | Q3TCH7 | 7 |
| Cytochrome b-c1 complex subunit Rieske, mitochondrial (EC 1.10.2.2) (Complex III subunit 5) (Cytochrome b-c1 complex subunit 5) (Rieske iron-sulfur protein) (RISP) (Ubiquinol-cytochrome c reductase iron-sulfur subunit) [Cleaved into: Cytochrome b-c1 complex subunit 11 (Complex III subunit IX) (Ubiquinol-cytochrome c reductase 8 kDa protein)] | Uqcrfs1 | Q9CR68 | 7 |
| Cytochrome c oxidase subunit 6C (Cytochrome c oxidase polypeptide VIc) | Cox6c | Q9CPQ1 | 7 |
| Cytohesin-1 (PH, SEC7 and coiled-coil domain-containing protein 1) (CLM1) (SEC7 homolog A) (mSec7-1) | Cyth1 Pscd1 | Q9QX11 | 7 |
| Cytokine receptor-like factor 3 (Cytokine receptor-like molecule 9) (CREME-9) (Cytokine receptor-related factor 4) | Crlf3 Creme9 Cytor4 | Q9Z2L7 | 7 |
| Cytoplasmic protein NCK1 (NCK adaptor protein 1) (Nck-1) | Nck1 | Q99M51 | 7 |
| Dedicator of cytokinesis protein 2 (Protein Hch) | Dock2 | Q8C3J5 | 7 |
| Dehydrogenase/reductase SDR family member 1 (EC 1.1.-.-) | Dhrs1 D14ertd484e | Q99L04 | 7 |
| Density-regulated protein (DRP) | Denr | Q9CQJ6 | 7 |
| Desmin | Des | P31001 | 7 |
| Disheveled-associated activator of morphogenesis 2 | Daam2 Kiaa0381 | Q80U19 | 7 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA polymerases I, II, and III subunit ABC1) (DNA-directed RNA polymerase II subunit E) (RPB5 homolog) | Polr2e | Q80UW8 | 7 |
| Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR) | Dusp3 | Q9D7X3 | 7 |
| Dynein light chain roadblock-type 1 (Dynein light chain 2A, cytoplasmic) | Dynlrb1 Dncl2a Dnlc2a | P62627 | 7 |
| Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1) (TCTEX-1) | Dynlt1 Tctel1 Tctex-1 Tctex1 | P51807 | 7 |
| Dystonin (Bullous pemphigoid antigen 1) (BPA) (Dystonia musculorum protein) (Hemidesmosomal plaque protein) (Microtubule actin cross-linking factor 2) | Dst Bpag1 Macf2 | Q91ZU6 | 7 |
| E3 ubiquitin-protein ligase MIB1 (EC 2.3.2.27) (DAPK-interacting protein 1) (DIP-1) (Mind bomb homolog 1) (RING-type E3 ubiquitin transferase MIB1) | Mib1 Dip1 Kiaa1323 Mib | Q80SY4 | 7 |
| E3 ubiquitin-protein ligase RNF114 (EC 2.3.2.27) (RING finger protein 114) (RING-type E3 ubiquitin transferase RNF114) (Zinc finger protein 228) (Zinc finger protein 313) | Rnf114 Zfp228 Zfp313 Znf228 Znf313 | Q9ET26 | 7 |
| E3 ubiquitin-protein ligase RNF149 (EC 2.3.2.27) (Goliath-related E3 ubiquitin-protein ligase 4) (RING finger protein 149) (RING-type E3 ubiquitin transferase RNF149) | Rnf149 Greul4 | Q3U2C5 | 7 |
| E3 ubiquitin/ISG15 ligase TRIM25 (EC 6.3.2.n3) (Estrogen-responsive finger protein) (RING-type E3 ubiquitin transferase) (EC 2.3.2.27) (RING-type E3 ubiquitin transferase TRIM25) (Tripartite motif-containing protein 25) (Ubiquitin/ISG15-conjugating enzyme TRIM25) (Zinc finger protein 147) | Trim25 Efp Zfp147 Znf147 | Q61510 | 7 |
| Elongator complex protein 2 (ELP2) (STAT3-interacting protein 1) (StIP1) | Elp2 Statip1 | Q91WG4 | 7 |
| EMILIN-2 (Basilin) (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) | Emilin2 | Q8K482 | 7 |
| Endophilin-B1 (SH3 domain-containing GRB2-like protein B1) | Sh3glb1 Kiaa0491 | Q9JK48 | 7 |
| Endoplasmic reticulum-Golgi intermediate compartment protein 1 (ER-Golgi intermediate compartment 32 kDa protein) (ERGIC-32) | Ergic1 Ergic32 | Q9DC16 | 7 |
| Enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17) (Enoyl-CoA hydratase 1) (Short-chain enoyl-CoA hydratase) (SCEH) | Echs1 | Q8BH95 | 7 |
| Eph receptor A3 (Ephrin type-A receptor 3) (Putative uncharacterized protein) | Epha3 | Q8BRB1 | 7 |
| Ephrin type-B receptor 1 (EC 2.7.10.1) | Ephb1 | Q8CBF3 | 7 |
| Ephrin type-B receptor 2 (EC 2.7.10.1) (Neural kinase) (Nuk receptor tyrosine kinase) (Tyrosine-protein kinase receptor EPH-3) (Tyrosine-protein kinase receptor SEK-3) | Ephb2 Epth3 Nuk Sek3 | P54763 | 7 |
| Epithelial cell adhesion molecule (Ep-CAM) (Epithelial glycoprotein 314) (EGP314) (mEGP314) (Protein 289A) (Tumor-associated calcium signal transducer 1) (CD antigen CD326) | Epcam Tacstd1 | Q99JW5 | 7 |
| Epsin-2 (EPS-15-interacting protein 2) (Intersectin-EH-binding protein 2) (Ibp2) | Epn2 | Q8CHU3 | 7 |
| ER membrane protein complex subunit 2 (Tetratricopeptide repeat protein 35) (TPR repeat protein 35) | Emc2 Kiaa0103 Ttc35 | Q9CRD2 | 7 |
| Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) | Eif5a2 | Q8BGY2 | 7 |
| Excitatory amino acid transporter 1 (Glial high affinity glutamate transporter) (High-affinity neuronal glutamate transporter) (Sodium-dependent glutamate/aspartate transporter 1) (GLAST-1) (Solute carrier family 1 member 3) | Slc1a3 Eaat1 Gmt1 | P56564 | 7 |
| Exocyst complex component 5 (Exocyst complex component Sec10) | Exoc5 Sec10l1 | Q3TPX4 | 7 |
| Exocyst complex component 8 (Exocyst complex 84 kDa subunit) | Exoc8 | Q6PGF7 | 7 |
| Exosome complex component MTR3 (Exosome component 6) (mRNA transport regulator 3 homolog) | Exosc6 Mtr3 | Q8BTW3 | 7 |
| Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses protein 1 homolog) | Ext1 | P97464 | 7 |
| Exportin-T (Exportin(tRNA)) (tRNA exportin) | Xpot | Q9CRT8 | 7 |
| Extended synaptotagmin-2 (E-Syt2) | Esyt2 D12Ertd551e Fam62b | Q3TZZ7 | 7 |
| Extracellular superoxide dismutase [Cu-Zn] (EC-SOD) (EC 1.15.1.1) | Sod3 | O09164 | 7 |
| F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat protein 20) (F-box/LRR-repeat protein 2-like) | Fbxl20 Fbl2 | Q9CZV8 | 7 |
| Flap endonuclease 1 (FEN-1) (EC 3.1.-.-) (Flap structure-specific endonuclease 1) | Fen1 FEN1 mCG_1942 | Q91Z50 | 7 |
| Flavin reductase (NADPH) (FR) (EC 1.5.1.30) (Biliverdin reductase B) (BVR-B) (EC 1.3.1.24) (Biliverdin-IX beta-reductase) (NADPH-dependent diaphorase) (NADPH-flavin reductase) (FLR) | Blvrb | Q923D2 | 7 |
| Fumarylacetoacetase (FAA) (EC 3.7.1.2) (Beta-diketonase) (Fumarylacetoacetate hydrolase) | Fah | P35505 | 7 |
| G protein-coupled receptor, family C, group 5, member A (Retinoic acid-induced protein 3) | Gprc5a mCG_22262 | G5E8C3 | 7 |
| Galactocerebrosidase (GALCERase) (EC 3.2.1.46) (Galactocerebroside beta-galactosidase) (Galactosylceramidase) (Galactosylceramide beta-galactosidase) | Galc | P54818 | 7 |
| Gamma-adducin (Adducin-like protein 70) | Add3 Addl | Q9QYB5 | 7 |
| Gamma-tubulin complex component 2 (GCP-2) | Tubgcp2 Gcp2 | Q921G8 | 7 |
| Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) | Gm2a | Q60648 | 7 |
| Glutathione peroxidase 3 (GPx-3) (GSHPx-3) (EC 1.11.1.9) (Plasma glutathione peroxidase) (GPx-P) (GSHPx-P) | Gpx3 | P46412 | 7 |
| Glyceraldehyde-3-phosphate dehydrogenase, testis-specific (EC 1.2.1.12) (Spermatogenic cell-specific glyceraldehyde 3-phosphate dehydrogenase 2) (GAPDH-2) (Spermatogenic glyceraldehyde-3-phosphate dehydrogenase) | Gapdhs Gapd-s Gapds | Q64467 | 7 |
| Glycerol-3-phosphate phosphatase (G3PP) (EC 3.1.3.21) (Aspartate-based ubiquitous Mg(2+)-dependent phosphatase) (AUM) (EC 3.1.3.48) (Phosphoglycolate phosphatase) (PGP) | Pgp | Q8CHP8 | 7 |
| Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1) | Gsk3a | Q2NL51 | 7 |
| GTPase-activating protein and VPS9 domain-containing protein 1 (GAPex-5) (Rab5-activating protein 6) | Gapvd1 Gapex5 Kiaa1521 | Q6PAR5 | 7 |
| Guanine deaminase (Guanase) (Guanine aminase) (EC 3.5.4.3) (Guanine aminohydrolase) (GAH) | Gda | Q9R111 | 7 |
| Guanine nucleotide-binding protein G(i) subunit alpha-1 (Adenylate cyclase-inhibiting G alpha protein) | Gnai1 Gnai-1 | B2RSH2 | 7 |
| Guanine nucleotide-binding protein-like 3 (Nucleolar GTP-binding protein 3) (Nucleostemin) | Gnl3 Ns | Q8CI11 | 7 |
| H-2 class I histocompatibility antigen, D-37 alpha chain | H2-T23 | P06339 | 7 |
| H-2 class I histocompatibility antigen, Q7 alpha chain (QA-2 antigen) | H2-Q7 | P14429 | 7 |
| H-2 class I histocompatibility antigen, Q8 alpha chain | H2-Q8 | P14430 | 7 |
| H/ACA ribonucleoprotein complex subunit 1 (Nucleolar protein family A member 1) (snoRNP protein GAR1) | Gar1 Nola1 | Q9CY66 | 7 |
| HEAT repeat-containing protein 5A | Heatr5a Kiaa1316 | Q5PRF0 | 7 |
| Heat shock 70 kDa protein 4L (Heat shock 70-related protein APG-1) (Osmotic stress protein 94) | Hspa4l Apg1 Hsp4l Osp94 | P48722 | 7 |
| Heparan sulfate 2-O-sulfotransferase 1 (2-O-sulfotransferase) (2-OST) (2OST) (EC 2.8.2.-) | Hs2st1 Hs2st | Q8R3H7 | 7 |
| Heparin cofactor 2 (Heparin cofactor II) (HC-II) (Protease inhibitor leuserpin-2) (Serpin D1) | Serpind1 Hcf2 Hcii | P49182 | 7 |
| Hepatocyte growth factor-regulated tyrosine kinase substrate | Hgs Hrs | Q99LI8 | 7 |
| Hepatoma-derived growth factor (HDGF) | Hdgf Tdrm1 | P51859 | 7 |
| Heterogeneous nuclear ribonucleoprotein D-like (hnRNP D-like) (hnRNP DL) (JKT41-binding protein) | Hnrnpdl Hnrpdl Jktbp | Q9Z130 | 7 |
| Hexokinase-1 (EC 2.7.1.1) (Hexokinase type I) (HK I) (Hexokinase, tumor isozyme) | Hk1 | P17710 | 7 |
| Histone H1t (Testicular H1 histone) | Hist1h1t H1ft H1t | Q07133 | 7 |
| Histone H2A | Hist1h2al | F8WIX8 | 7 |
| Histone H2B type 2-E (H2b 613) | Hist2h2be | Q64524 | 7 |
| Histone-arginine methyltransferase CARM1 (EC 2.1.1.319) (Coactivator-associated arginine methyltransferase 1) (Protein arginine N-methyltransferase 4) | Carm1 Prmt4 | Q9WVG6 | 7 |
| Hormone-sensitive lipase (HSL) (EC 3.1.1.79) | Lipe | P54310 | 7 |
| Ig gamma-2B chain C region | Igh-3 | P01867 | 7 |
| Ig gamma-3 chain C region | 0 | P03987 | 7 |
| Ig heavy chain V region 441 | 0 | P01806 | 7 |
| Ig kappa chain V-II region 26-10 | 0 | P01631 | 7 |
| Immunoglobulin-binding protein 1 (Alpha4 phosphoprotein) (CD79a-binding protein 1) (Lymphocyte signal transduction molecule alpha 4) (Protein phosphatase 2/4/6 regulatory subunit) (p52) | Igbp1 Pc52 | Q61249 | 7 |
| Importin-8 (Imp8) (Ran-binding protein 8) (RanBP8) | Ipo8 | Q7TMY7 | 7 |
| Importin-9 (Imp9) (Importin-9a) (Imp9a) (Importin-9b) (Imp9b) (Ran-binding protein 9) (RanBP9) | Ipo9 Imp9 Ranbp9 | Q91YE6 | 7 |
| Integrator complex subunit 3 (Int3) (SOSS complex subunit A) (Sensor of single-strand DNA complex subunit A) (SOSS-A) (Sensor of ssDNA subunit A) | Ints3 | Q7TPD0 | 7 |
| Integrin alpha-2 (CD49 antigen-like family member B) (Collagen receptor) (Platelet membrane glycoprotein Ia) (GPIa) (VLA-2 subunit alpha) (CD antigen CD49b) | Itga2 | Q62469 | 7 |
| Integrin alpha-L (CD11 antigen-like family member A) (Leukocyte adhesion glycoprotein LFA-1 alpha chain) (LFA-1A) (Leukocyte function-associated molecule 1 alpha chain) (Lymphocyte antigen 15) (Ly-15) (CD antigen CD11a) | Itgal Lfa-1 Ly-15 | P24063 | 7 |
| IQ motif-containing GTPase-activating protein 3 | Iqgap3 | F8VQ29 | 7 |
| Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit gamma) (NAD(+)-specific ICDH subunit gamma) | Idh3g | P70404 | 7 |
| Isocitrate dehydrogenase [NAD] subunit, mitochondrial (EC 1.1.1.41) | Idh3b mCG_9915 | Q91VA7 | 7 |
| Isovaleryl-CoA dehydrogenase, mitochondrial (IVD) (EC 1.3.8.4) | Ivd | Q9JHI5 | 7 |
| Keratin 90 | Krt90 4732456N10Rik | E9Q1Z0 | 7 |
| Keratin, type I cytoskeletal 18 (Cytokeratin endo B) (Keratin D) (Cytokeratin-18) (CK-18) (Keratin-18) (K18) | Krt18 Kerd Krt1-18 | P05784 | 7 |
| Keratin, type II cytoskeletal 4 (Cytokeratin-4) (CK-4) (Cytoskeletal 57 kDa keratin) (Keratin-4) (K4) (Type-II keratin Kb4) | Krt4 Krt2-4 | P07744 | 7 |
| Kinase D-interacting substrate 220 | Kidins220 | E9Q9B7 | 7 |
| Kinesin-like protein KIF20A (Kinesin-like protein 174) (Rab6-interacting kinesin-like protein) (Rabkinesin-6) | Kif20a Rab6kifl | P97329 | 7 |
| Krev interaction trapped protein 1 (Krev interaction trapped 1) (Cerebral cavernous malformations 1 protein homolog) | Krit1 Ccm1 | Q6S5J6 | 7 |
| Lanosterol 14-alpha demethylase (LDM) (EC 1.14.13.70) (CYPLI) (Cytochrome P450 51A1) (Cytochrome P450-14DM) (Cytochrome P45014DM) (Cytochrome P450LI) (Sterol 14-alpha demethylase) | Cyp51a1 Cyp51 | Q8K0C4 | 7 |