| Histone H2A type 1-C | Hist1h2ac | C0HKE2 | 6 |
| Histone H2A type 1-D | Hist1h2ad | C0HKE3 | 6 |
| Histone H2A type 1-E | Hist1h2ae | C0HKE4 | 6 |
| Histone H2A type 1-G | Hist1h2ag | C0HKE5 | 6 |
| Histone H2A type 1-I | Hist1h2ai | C0HKE6 | 6 |
| Histone H2A type 1-N | Hist1h2an | C0HKE7 | 6 |
| Histone H2A type 1-O | Hist1h2ao | C0HKE8 | 6 |
| Histone H2A type 1-P | Hist1h2ap | C0HKE9 | 6 |
| Histone H2B type 3-B | Hist3h2bb Hist3h2bb-ps | Q8CGP0 | 6 |
| Host cell factor 1 (HCF) (HCF-1) (C1 factor) [Cleaved into: HCF N-terminal chain 1; HCF N-terminal chain 2; HCF N-terminal chain 3; HCF N-terminal chain 4; HCF N-terminal chain 5; HCF N-terminal chain 6; HCF C-terminal chain 1; HCF C-terminal chain 2; HCF C-terminal chain 3; HCF C-terminal chain 4; HCF C-terminal chain 5; HCF C-terminal chain 6] | Hcfc1 | Q61191 | 6 |
| Hsc70-interacting protein | St13 | F8WJK8 | 6 |
| Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HCDH) (EC 1.1.1.35) (Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase) (Short-chain 3-hydroxyacyl-CoA dehydrogenase) | Hadh Hadhsc Mschad Schad | Q61425 | 6 |
| Immunoglobulin superfamily member 8 | Igsf8 | G3UYZ1 | 6 |
| Inactive peptidyl-prolyl cis-trans isomerase FKBP6 (Inactive PPIase FKBP6) (36 kDa FK506-binding protein) (36 kDa FKBP) (FKBP-36) (FK506-binding protein 6) (FKBP-6) (Immunophilin FKBP36) | Fkbp6 Fkbp36 | Q91XW8 | 6 |
| Inositol (Myo)-1(Or 4)-monophosphatase 1 (Inositol (Myo)-1(Or 4)-monophosphatase 1, isoform CRA_a) (Inositol monophosphatase 1) (Myo-inositol monophosphatase 1) (Putative uncharacterized protein) | Impa1 mCG_1639 | Q924B0 | 6 |
| Integrator complex subunit 11 (Int11) (EC 3.1.27.-) (Cleavage and polyadenylation-specific factor 3-like protein) (CPSF3-like protein) | Ints11 Cpsf3l | Q9CWS4 | 6 |
| Integrator complex subunit 6 (Int6) (DBI-1) (Protein DDX26) | Ints6 Dbi1 Ddx26 | Q6PCM2 | 6 |
| Integrin alpha-7 [Cleaved into: Integrin alpha-7 heavy chain; Integrin alpha-7 light chain] | Itga7 | Q61738 | 6 |
| Integrin beta | Itgb5 | Q6PE70 | 6 |
| Interferon-induced, double-stranded RNA-activated protein kinase (EC 2.7.11.1) (Eukaryotic translation initiation factor 2-alpha kinase 2) (eIF-2A protein kinase 2) (Interferon-inducible RNA-dependent protein kinase) (P1/eIF-2A protein kinase) (Protein kinase RNA-activated) (PKR) (Protein kinase R) (Serine/threonine-protein kinase TIK) (Tyrosine-protein kinase EIF2AK2) (EC 2.7.10.2) (p68 kinase) | Eif2ak2 Pkr Prkr Tik | Q03963 | 6 |
| Interferon-inducible double-stranded RNA-dependent protein kinase activator A (PKR-associated protein X) (PKR-associating protein X) (RAX) (Protein activator of the interferon-induced protein kinase) (Protein kinase, interferon-inducible double-stranded RNA-dependent activator) | Prkra Rax | Q9WTX2 | 6 |
| Interferon-stimulated gene 20 kDa protein (EC 3.1.13.1) (Promyelocytic leukemia nuclear body-associated protein ISG20) (Protein DnaQL) | Isg20 | Q9JL16 | 6 |
| Isoleucine--tRNA ligase, mitochondrial (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS) | Iars2 | Q8BIJ6 | 6 |
| Isopentenyl-diphosphate Delta-isomerase 1 (EC 5.3.3.2) (Isopentenyl pyrophosphate isomerase 1) (IPP isomerase 1) (IPPI1) | Idi1 | P58044 | 6 |
| Keratin, type II cytoskeletal 7 (Cytokeratin-7) (CK-7) (Keratin-7) (K7) (Type-II keratin Kb7) | Krt7 Krt2-7 | Q9DCV7 | 6 |
| Kinesin heavy chain isoform 5A (Kinesin heavy chain neuron-specific 1) (Neuronal kinesin heavy chain) (NKHC) | Kif5a Kiaa4086 Kif5 Nkhc1 | P33175 | 6 |
| Kinesin heavy chain isoform 5C (Kinesin heavy chain neuron-specific 2) | Kif5c Nkhc2 | P28738 | 6 |
| Kinesin-like protein KIF16B | Kif16b Kiaa1590 | B1AVY7 | 6 |
| Kinesin-like protein KIF1C | Kif1c | O35071 | 6 |
| Kinesin-like protein KIF20B (Kinesin family member 20B) (Kinesin-related motor interacting with PIN1) (M-phase phosphoprotein 1) (MPP1) | Kif20b Mphosph1 | Q80WE4 | 6 |
| Kinesin-like protein KIF2C (Mitotic centromere-associated kinesin) (MCAK) | Kif2c | Q922S8 | 6 |
| L-dopachrome tautomerase (DCT) (DT) (EC 5.3.3.12) (DOPAchrome conversion factor) (DOPAchrome isomerase) (DOPAchrome oxidoreductase) (L-dopachrome Delta-isomerase) (SLATY locus protein) (Tyrosinase-related protein 2) (TRP-2) (TRP2) | Dct Tyrp-2 Tyrp2 | P29812 | 6 |
| Leucine-rich repeat and calponin homology domain-containing protein 1 (Calponin homology domain-containing protein 1) | Lrch1 Chdc1 Kiaa1016 | P62046 | 6 |
| Leucine-rich repeat and calponin homology domain-containing protein 3 | Lrch3 | Q8BVU0 | 6 |
| Leucine-rich repeat protein SHOC-2 (Protein soc-2 homolog) (Protein sur-8 homolog) | Shoc2 | O88520 | 6 |
| LIM domain and actin-binding protein 1 (Epithelial protein lost in neoplasm) (mEPLIN) | Lima1 D15Ertd366e Eplin | Q9ERG0 | 6 |
| Lipolysis-stimulated lipoprotein receptor (Lipolysis-stimulated receptor) (Liver-specific bHLH-Zip transcription factor) (Liver-specific gene on mouse chromosome 7 protein) | Lsr Lisch7 | Q99KG5 | 6 |
| Lipoma HMGIC fusion partner | Lhfp | Q8BM86 | 6 |
| Liprin-beta-2 (Coiled-coil-like protein 1) (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein-binding protein 2) (PTPRF-interacting protein-binding protein 2) | Ppfibp2 Cclp1 | O35711 | 6 |
| Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin) | Lrp2 | A2ARV4 | 6 |
| Lysosomal Pro-X carboxypeptidase (EC 3.4.16.2) (Proline carboxypeptidase) (Prolylcarboxypeptidase) (PRCP) | Prcp | Q7TMR0 | 6 |
| Lysyl oxidase homolog 2 (EC 1.4.3.13) (Lysyl oxidase-like protein 2) | Loxl2 | P58022 | 6 |
| Lysyl oxidase homolog 3 (EC 1.4.3.-) (EC 1.4.3.13) (Lysyl oxidase-like protein 3) (Lysyl oxidase-related protein 2) | Loxl3 Lor2 | Q9Z175 | 6 |
| Macrophage mannose receptor 1 (MMR) (CD antigen CD206) | Mrc1 | Q61830 | 6 |
| Macrosialin (CD antigen CD68) | Cd68 | P31996 | 6 |
| Major facilitator superfamily domain-containing protein 1 | Mfsd1 | Q9DC37 | 6 |
| Maleylacetoacetate isomerase (MAAI) (EC 5.2.1.2) (GSTZ1-1) (Glutathione S-transferase zeta 1) (EC 2.5.1.18) | Gstz1 Maai | Q9WVL0 | 6 |
| Mannose-1-phosphate guanyltransferase alpha (GDP-mannose pyrophosphorylase A) (GTP-mannose-1-phosphate guanylyltransferase alpha) | Gmppa | Q922H4 | 6 |
| Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC 3.2.1.113) (Man(9)-alpha-mannosidase) (Man9-mannosidase) (Mannosidase alpha class 1A member 1) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) | Man1a1 Man1a | P45700 | 6 |
| MCG140784 (Putative uncharacterized protein) (Trypsin 10) (Trypsinogen 10) | Try10 Tcrb-V20 trypsinogen mCG_140784 | Q792Z1 | 6 |
| Melan-A | Mlana | Q2TA50 | 6 |
| Melanocyte protein PMEL (Putative uncharacterized protein) (Silver) (Silver, isoform CRA_a) | Pmel Si mCG_18669 | Q9CZB2 | 6 |
| Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 (BAI1-associated protein 1) (BAP-1) (Membrane-associated guanylate kinase inverted 1) (MAGI-1) | Magi1 Baiap1 Bap1 | Q6RHR9 | 6 |
| Membrane-associated transporter protein (Melanoma antigen AIM1) (Protein AIM-1) (Protein underwhite) (Solute carrier family 45 member 2) | Slc45a2 Aim1 Matp uw | P58355 | 6 |
| Metal transporter CNNM3 (Ancient conserved domain-containing protein 3) (mACDP3) (Cyclin-M3) | Cnnm3 Acdp3 | Q32NY4 | 6 |
| Metalloproteinase inhibitor 1 (Collagenase inhibitor 16C8 fibroblast) (Erythroid-potentiating activity) (EPA) (TPA-S1) (TPA-induced protein) (Tissue inhibitor of metalloproteinases 1) (TIMP-1) | Timp1 Timp Timp-1 | P12032 | 6 |
| Metalloreductase STEAP2 (EC 1.16.1.-) (Six-transmembrane epithelial antigen of prostate 2) | Steap2 | Q8BWB6 | 6 |
| Metastasis-associated protein MTA1 | Mta1 | Q8K4B0 | 6 |
| Metastasis-associated protein MTA1 (Metastasis-associated protein MTA1 isoform 2) | Mta1 | F8WHY8 | 6 |
| Methionine aminopeptidase 2 (MAP 2) (MetAP 2) (EC 3.4.11.18) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) (Peptidase M) | Metap2 Mnpep P67eif2 | O08663 | 6 |
| Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (MMSDH) (Malonate-semialdehyde dehydrogenase [acylating]) (EC 1.2.1.18) (EC 1.2.1.27) (Aldehyde dehydrogenase family 6 member A1) | Aldh6a1 | Q9EQ20 | 6 |
| Microtubule-associated protein 1B (MAP-1B) (MAP1(X)) (MAP1.2) [Cleaved into: MAP1B heavy chain; MAP1 light chain LC1] | Map1b Mtap1b Mtap5 | P14873 | 6 |
| Microtubule-associated protein 1S (MAP-1S) (BPY2-interacting protein 1) (Microtubule-associated protein 8) [Cleaved into: MAP1S heavy chain; MAP1S light chain] | Map1s Bpy2ip1 Map8 Mtap1s | Q8C052 | 6 |
| Microtubule-associated proteins 1A/1B light chain 3A (Autophagy-related protein LC3 A) (Autophagy-related ubiquitin-like modifier LC3 A) (MAP1 light chain 3-like protein 1) (MAP1A/MAP1B light chain 3 A) (MAP1A/MAP1B LC3 A) (Microtubule-associated protein 1 light chain 3 alpha) | Map1lc3a | Q91VR7 | 6 |
| Microtubule-associated proteins 1A/1B light chain 3B (Autophagy-related protein LC3 B) (Autophagy-related ubiquitin-like modifier LC3 B) (MAP1 light chain 3-like protein 2) (MAP1A/MAP1B light chain 3 B) (MAP1A/MAP1B LC3 B) (Microtubule-associated protein 1 light chain 3 beta) | Map1lc3b Map1alc3 Map1lc3 | Q9CQV6 | 6 |
| Mitochondrial carrier homolog 2 | Mtch2 | Q791V5 | 6 |
| Mitochondrial-processing peptidase subunit beta (EC 3.4.24.64) (Beta-MPP) (P-52) | Pmpcb | Q9CXT8 | 6 |
| MKI67 FHA domain-interacting nucleolar phosphoprotein (Nucleolar protein interacting with the FHA domain of pKI-67) (mNIFK) | Nifk Mki67ip | Q91VE6 | 6 |
| Multidrug resistance-associated protein 5 (ATP-binding cassette sub-family C member 5) (Multi-specific organic anion transporter C) (MOAT-C) (SMRP) | Abcc5 Abcc5a Mrp5 | Q9R1X5 | 6 |
| Multiple PDZ domain protein (Multi-PDZ domain protein 1) | Mpdz Mupp1 | Q8VBX6 | 6 |
| Muskelin | Mkln1 | O89050 | 6 |
| Myosin light chain 6B (Smooth muscle and nonmuscle myosin light chain alkali 6B) | Myl6b | Q8CI43 | 6 |
| N-alpha-acetyltransferase 40 (EC 2.3.1.257) (N-acetyltransferase 11) (N-alpha-acetyltransferase D) (NatD) (Protein acetyltransferase 1) | Naa40 Nat11 Patt1 | Q8VE10 | 6 |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic and interferon-induced mortality 19 protein) (GRIM-19) (Gene associated with retinoic and IFN-induced mortality 19 protein) (NADH-ubiquinone oxidoreductase B16.6 subunit) | Ndufa13 Grim19 | Q9ERS2 | 6 |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (Complex I-19kD) (CI-19kD) (Complex I-PGIV) (CI-PGIV) (NADH-ubiquinone oxidoreductase 19 kDa subunit) | Ndufa8 | Q9DCJ5 | 6 |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 (Complex I-PDSW) (CI-PDSW) (NADH-ubiquinone oxidoreductase PDSW subunit) | Ndufb10 | Q9DCS9 | 6 |
| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH-ubiquinone oxidoreductase 51 kDa subunit) | Ndufv1 | Q91YT0 | 6 |
| Nardilysin (EC 3.4.24.61) (N-arginine dibasic convertase) (NRD convertase) (NRD-C) (Nardilysin convertase) | Nrdc Nrd1 | Q8BHG1 | 6 |
| NEDD8 (Neddylin) (Neural precursor cell expressed developmentally down-regulated protein 8) (NEDD-8) (Ubiquitin-like protein Nedd8) | Nedd8 Nedd-8 | P29595 | 6 |
| Neogenin | Neo1 Ngn | P97798 | 6 |
| Nephronectin (Preosteoblast EGF-like repeat protein with MAM domain) | Npnt Neph1 Poem | Q91V88 | 6 |
| Netrin receptor UNC5C (Protein unc-5 homolog 3) (Protein unc-5 homolog C) (Rostral cerebellar malformation protein) | Unc5c Rcm Unc5h3 | O08747 | 6 |
| Neurogenic locus notch homolog protein 2 (Notch gene homolog 2 (Drosophila), isoform CRA_a) | Notch2 mCG_11101 | G5E8J0 | 6 |
| Neuronal cell adhesion molecule (Nr-CAM) (Neuronal surface protein Bravo) (mBravo) (NgCAM-related cell adhesion molecule) (Ng-CAM-related) | Nrcam Kiaa0343 | Q810U4 | 6 |
| Neutral ceramidase (N-CDase) (NCDase) (EC 3.5.1.23) (Acylsphingosine deacylase 2) (N-acylsphingosine amidohydrolase 2) [Cleaved into: Neutral ceramidase soluble form] | Asah2 | Q9JHE3 | 6 |
| Nodal modulator 1 | Nomo1 | Q6GQT9 | 6 |
| Nostrin (Disabled homolog 2-interacting protein 2) (Dab2-interacting protein 2) (Nitric oxide synthase trafficker) (eNOS-trafficking inducer) | Nostrin Daip2 | Q6WKZ7 | 6 |
| Nuclear mitotic apparatus protein 1 | Numa1 | E9Q7G0 | 6 |
| Nuclear pore complex protein Nup85 (85 kDa nucleoporin) (FROUNT) (Nucleoporin Nup85) (Pericentrin-1) | Nup85 Pcnt1 | Q8R480 | 6 |
| Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62) | Nup62 | Q63850 | 6 |
| Nucleolysin TIAR (TIA-1-related protein) | Tial1 | P70318 | 6 |
| Nucleoporin Nup43 (Nup107-160 subcomplex subunit Nup43) | Nup43 | P59235 | 6 |
| Nucleoprotein TPR (NPC-associated intranuclear protein) (Translocated promoter region and nuclear basket protein) | Tpr | F6ZDS4 | 6 |
| NudC domain-containing protein 1 | Nudcd1 | Q6PIP5 | 6 |
| Opioid growth factor receptor (OGFr) (Zeta-type opioid receptor) | Ogfr | Q99PG2 | 6 |
| Paladin | Pald1 Pald | P70261 | 6 |
| Palmitoyl-protein thioesterase 1 (PPT-1) (EC 3.1.2.22) (Palmitoyl-protein hydrolase 1) | Ppt1 Cln1 Ppt | O88531 | 6 |
| PDZ and LIM domain protein 7 (LIM mineralization protein) (LMP) (Protein enigma) | Pdlim7 Enigma | Q3TJD7 | 6 |
| Pentraxin-related protein PTX3 (Pentaxin-related protein PTX3) (Tumor necrosis factor-inducible gene 14 protein) (TSG-14) | Ptx3 Tsg14 | P48759 | 6 |
| Peptidyl-prolyl cis-trans isomerase E (PPIase E) (EC 5.2.1.8) (Cyclophilin E) (Cyclophilin-33) (Rotamase E) | Ppie Cyp33 | Q9QZH3 | 6 |