| CDC23 (Cell division cycle 23, yeast, homolog), isoform CRA_a (Cell division cycle protein 23 homolog) | Cdc23 mCG_123924 | G3X8W7 | 3 |
| CDC42 small effector protein 1 | Cdc42se1 | Q8BHL7 | 3 |
| CDC42 small effector protein 2 | Cdc42se2 | Q8BGH7 | 3 |
| CEA-related cell adhesion molecule 1, isoform 1/2L (Carcinoembryonic antigen-related cell adhesion molecule 1) | Ceacam1 CEACAM1a-2L | Q3LFS9 | 3 |
| Cell division cycle protein 20 homolog (mmCdc20) (p55CDC) | Cdc20 | Q9JJ66 | 3 |
| Centrin-2 (Fragment) | Cetn2 | B1AUQ7 | 3 |
| Centromere protein J (CENP-J) | Cenpj | Q569L8 | 3 |
| Centromere protein V (CENP-V) (Proline-rich protein 6) | Cenpv Prr6 | Q9CXS4 | 3 |
| Centromere-associated protein E | Cenpe | E9QKK1 | 3 |
| Centromere-associated protein E (Centromere protein E) (CENP-E) (Kinesin superfamily protein 10) (KIF10) (Motor domain of KIF10) | Cenpe | Q6RT24 | 3 |
| Centrosomal protein of 170 kDa (Cep170) | Cep170 Kiaa0470 | Q6A065 | 3 |
| Ceruloplasmin | Cp | E9PZD8 | 3 |
| cGMP-dependent protein kinase 1 (cGK 1) (cGK1) (EC 2.7.11.12) (cGMP-dependent protein kinase I) (cGKI) | Prkg1 Prkg1b Prkgr1a Prkgr1b | P0C605 | 3 |
| Chloride channel, nucleotide-sensitive, 1A (Chloride channel, nucleotide-sensitive, 1A, isoform CRA_b) (Methylosome subunit pICln) (Putative uncharacterized protein) | Clns1a mCG_7058 | Q923F1 | 3 |
| Chloride intracellular channel protein 3 | Clic3 | Q9D7P7 | 3 |
| Choline transporter-like protein 1 | Slc44a1 | A2AMH4 | 3 |
| Choline transporter-like protein 4 (Solute carrier family 44 member 4) (Thiamine pyrophosphate transporter 1) (mTPPT1) | Slc44a4 Ctl4 Ng22 TPPT1 | Q91VA1 | 3 |
| Chromatin assembly factor 1 subunit A (CAF-1 subunit A) (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-I p150) | Chaf1a Caip150 | Q9QWF0 | 3 |
| Chromatin assembly factor 1 subunit B (CAF-1 subunit B) (Chromatin assembly factor I p60 subunit) (CAF-I 60 kDa subunit) (CAF-I p60) | Chaf1b | Q9D0N7 | 3 |
| Chromobox protein homolog 1 (Heterochromatin protein 1 homolog beta) (HP1 beta) (Heterochromatin protein p25) (M31) (Modifier 1 protein) | Cbx1 Cbx | P83917 | 3 |
| Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin) | Chd8 Kiaa1564 | Q09XV5 | 3 |
| Clathrin interactor 1 (MCG22297, isoform CRA_b) | Clint1 mCG_22297 | Q5SUH6 | 3 |
| Claudin-12 | Cldn12 | Q9ET43 | 3 |
| Claudin-18 | Cldn18 | P56857 | 3 |
| Cleavage and polyadenylation specificity factor subunit 1 (Cleavage and polyadenylation specificity factor 160 kDa subunit) (CPSF 160 kDa subunit) | Cpsf1 Cpsf160 | Q9EPU4 | 3 |
| Cleavage and polyadenylation specificity factor subunit 7 | Cpsf7 | Q8BTV2 | 3 |
| Cleavage stimulation factor subunit 1 (CF-1 50 kDa subunit) (Cleavage stimulation factor 50 kDa subunit) (CSTF 50 kDa subunit) (CstF-50) | Cstf1 | Q99LC2 | 3 |
| CLIP-associating protein 1 (Cytoplasmic linker-associated protein 1) | Clasp1 Kiaa0622 | Q80TV8 | 3 |
| CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 (Alpha 2,3-ST 4) (Beta-galactoside alpha-2,3-sialyltransferase 4) (EC 2.4.99.-) (Alpha 2,3-sialyltransferase IV) (Gal-beta-1,4-GalNAc-alpha-2,3-sialyltransferase) (ST3Gal IV) (ST3GalIV) (Sialyltransferase 4C) (SIAT4-C) | St3gal4 Siat4c | Q91Y74 | 3 |
| Coiled-coil domain-containing protein 124 | Ccdc124 | Q9D8X2 | 3 |
| Coiled-coil domain-containing protein 167 | Ccdc167 | Q9D162 | 3 |
| Coiled-coil domain-containing protein 93 | Ccdc93 | E9QAD4 | 3 |
| Coiled-coil domain-containing protein 96 | Ccdc96 | Q9CR92 | 3 |
| Col4a5 protein (Collagen, type IV, alpha 5) (Putative uncharacterized protein) | Col4a5 | Q63ZW6 | 3 |
| Collagen alpha-1(VIII) chain [Cleaved into: Vastatin] | Col8a1 | Q00780 | 3 |
| Collagen alpha-1(XI) chain | Col11a1 | Q61245 | 3 |
| Collagen alpha-1(XIV) chain | Col14a1 | Q80X19 | 3 |
| Collectin-12 (Collectin placenta protein 1) (CL-P1) (Scavenger receptor with C-type lectin) | Colec12 Clp1 Srcl | Q8K4Q8 | 3 |
| COMM domain-containing protein 9 | Commd9 | Q8K2Q0 | 3 |
| Complement C1r-B subcomponent (EC 3.4.21.41) (Complement component 1 subcomponent r-B) [Cleaved into: Complement C1r-B subcomponent heavy chain; Complement C1r-B subcomponent light chain] | C1rb C1r | Q8CFG9 | 3 |
| Complement C2 (EC 3.4.21.43) (C3/C5 convertase) [Cleaved into: Complement C2b fragment; Complement C2a fragment] | C2 | P21180 | 3 |
| Complement component C8 gamma chain | C8g | Q8VCG4 | 3 |
| Complement decay-accelerating factor, GPI-anchored (DAF-GPI) (CD antigen CD55) | Cd55 Cd55a Daf Daf1 | Q61475 | 3 |
| Conserved oligomeric Golgi complex subunit 3 (COG complex subunit 3) (Component of oligomeric Golgi complex 3) | Cog3 | Q8CI04 | 3 |
| Conserved oligomeric Golgi complex subunit 6 (COG complex subunit 6) (Component of oligomeric Golgi complex 6) | Cog6 Kiaa1134 | Q8R3I3 | 3 |
| Conserved oligomeric Golgi complex subunit 7 (COG complex subunit 7) (Component of oligomeric Golgi complex 7) | Cog7 | Q3UM29 | 3 |
| Conserved oligomeric Golgi complex subunit 8 (COG complex subunit 8) (Component of oligomeric Golgi complex 8) | Cog8 MNCb-5704 | Q9JJA2 | 3 |
| COP9 signalosome complex subunit 1 (G protein pathway suppressor 1) | Gps1 | Q3MIA8 | 3 |
| COP9 signalosome complex subunit 1 (MCG2137, isoform CRA_b) | Gps1 mCG_2137 | G3UXW9 | 3 |
| COP9 signalosome complex subunit 6 | Cops6 | D3Z0F5 | 3 |
| Copine-2 | Cpne2 | A0A0R4J1D0 | 3 |
| Copine-6 (Copine VI) (Neuronal-copine) (N-copine) | Cpne6 | Q9Z140 | 3 |
| Copine-6 (Putative uncharacterized protein) | Cpne6 | Q3UYN2 | 3 |
| Copper chaperone for superoxide dismutase (Superoxide dismutase copper chaperone) | Ccs Ccsd | Q9WU84 | 3 |
| Creatine kinase M-type (EC 2.7.3.2) (Creatine kinase M chain) (M-CK) | Ckm Ckmm | P07310 | 3 |
| CST complex subunit CTC1 (Alpha-accessory factor of 132 kDa) (AAF-132) (AAF132) (Conserved telomere maintenance component 1) | Ctc1 | Q5SUQ9 | 3 |
| cTAGE family member 5 (Protein cTAGE-5) (Meningioma-expressed antigen 6) | Ctage5 Mea6 Mgea6 | Q8R311 | 3 |
| CWF19-like protein 1 | Cwf19l1 | Q8CI33 | 3 |
| Cyclin Y-like 1 | Ccnyl1 | D3YUJ3 | 3 |
| Cyclin-dependent kinase 11B (Cell division cycle 2-like protein kinase 1) (Cell division protein kinase 11) (Cyclin-dependent kinase 11) (EC 2.7.11.22) (Galactosyltransferase-associated protein kinase p58/GTA) (PITSLRE serine/threonine-protein kinase CDC2L1) | Cdk11b Cdc2l1 Cdk11 | P24788 | 3 |
| Cyclin-dependent kinase 12 (EC 2.7.11.22) (EC 2.7.11.23) (Cdc2-related kinase, arginine/serine-rich) (CrkRS) (Cell division cycle 2-related protein kinase 7) (CDC2-related protein kinase 7) (Cell division protein kinase 12) | Cdk12 Crk7 Crkrs Kiaa0904 | Q14AX6 | 3 |
| Cyclin-dependent kinase 13 (EC 2.7.11.22) (EC 2.7.11.23) (CDC2-related protein kinase 5) (Cell division cycle 2-like protein kinase 5) (Cell division protein kinase 13) | Cdk13 Cdc2l5 Kiaa1791 | Q69ZA1 | 3 |
| Cyclin-dependent kinase 16 (EC 2.7.11.22) (CRK5) (Cell division protein kinase 16) (PCTAIRE-motif protein kinase 1) (Serine/threonine-protein kinase PCTAIRE-1) | Cdk16 Crk5 Pctaire1 Pctk1 | Q04735 | 3 |
| Cyclin-dependent kinases regulatory subunit 1 (CKS-1) (Sid 1334) | Cks1b Cks1 Sid1334 | P61025 | 3 |
| Cyclin-H | Ccnh | Q61458 | 3 |
| Cystatin (Fragment) | Cst3 | A2APX3 | 3 |
| Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (Ubiquinol-cytochrome c reductase complex 14 kDa protein) | Uqcrb | Q9D855 | 3 |
| Cytochrome c oxidase subunit NDUFA4 | Ndufa4 | A0A0N4SVQ1 | 3 |
| Cytochrome P450 20A1 (EC 1.14.-.-) | Cyp20a1 | Q8BKE6 | 3 |
| Cytochrome P450 2A5 (EC 1.14.14.1) (CYPIIA5) (Coumarin 7-hydroxylase) (Cytochrome P450-15-COH) (Cytochrome P450-IIA3.2) | Cyp2a5 Cyp2a-5 | P20852 | 3 |
| Cytochrome P450 2B10 (EC 1.14.14.1) (CYPIIB10) (CYPIIB20) (Cytochrome P450 2B20) (Cytochrome P450 clone PF3/46) (Cytochrome P450-16-alpha) (P24) (Testosterone 16-alpha hydroxylase) | Cyp2b10 Cyp2b-10 Cyp2b20 | P12791 | 3 |
| Cytochrome P450 4B1 (EC 1.14.14.1) (CYPIVB1) | Cyp4b1 | Q64462 | 3 |
| Cytohesin-2 (ARF nucleotide-binding site opener) (Protein ARNO) (PH, SEC7 and coiled-coil domain-containing protein 2) (CLM2) (SEC7 homolog B) (mSec7-2) | Cyth2 Pscd2 Sec7b | P63034 | 3 |
| Cytosolic Fe-S cluster assembly factor NUBP1 (Nucleotide-binding protein 1) (NBP 1) | Nubp1 | Q9R060 | 3 |
| Cytospin-B (Sperm antigen with calponin homology and coiled-coil domains 1) | Specc1 Cytsb Kiaa4061 | Q5SXY1 | 3 |
| DAZ associated protein 1, isoform CRA_b (DAZ-associated protein 1) (Putative uncharacterized protein) | Dazap1 mCG_142352 | Q3UGB5 | 3 |
| DBH-like monooxygenase protein 1 (EC 1.14.17.-) (DBH-related protein) (Monooxygenase X) | Moxd1 Dbhr Mox | Q9CXI3 | 3 |
| DCC-interacting protein 13-beta (Dip13-beta) (Adapter protein containing PH domain, PTB domain and leucine zipper motif 2) | Appl2 Dip13b Dip3b | Q8K3G9 | 3 |
| DDB1- and CUL4-associated factor 1 (Serine/threonine-protein kinase VPRBP) (EC 2.7.11.1) | Dcaf1 Kiaa0800 Vprbp | Q80TR8 | 3 |
| DDB1- and CUL4-associated factor 8 (WD repeat-containing protein 42A) | Dcaf8 D1Ucla4 H326 Wdr42a | Q8N7N5 | 3 |
| Dedicator of cytokinesis protein 11 | Dock11 | A2AF67 | 3 |
| Dedicator of cytokinesis protein 9 (Cdc42 guanine nucleotide exchange factor zizimin-1) (Zizimin-1) | Dock9 D14Wsu89e Kiaa1058 Ziz1 | Q8BIK4 | 3 |
| Dehydrodolichyl diphosphate synthase complex subunit Dhdds (EC 2.5.1.87) (Cis-isoprenyltransferase) (CIT) (Cis-IPTase) | Dhdds | Q99KU1 | 3 |
| DENN domain-containing protein 4C | Dennd4c | A6H8H2 | 3 |
| Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 | Samhd1 | F8WJE0 | 3 |
| Deoxynucleotidyltransferase terminal-interacting protein 2 | Dnttip2 | Q8R2M2 | 3 |
| DEP domain-containing mTOR-interacting protein (DEP domain-containing protein 6) | Deptor Depdc6 Kiaa4200 | Q570Y9 | 3 |
| Derlin-1 (Degradation in endoplasmic reticulum protein 1) (Der1-like protein 1) | Derl1 Der1 | Q99J56 | 3 |
| Deubiquitinating protein VCIP135 (EC 3.4.19.12) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135) | Vcpip1 Vcip135 | Q8CDG3 | 3 |
| Diacylglycerol kinase (DAG kinase) (EC 2.7.1.107) | Dgkh | D3YXJ0 | 3 |
| Diacylglycerol kinase (DAG kinase) (EC 2.7.1.107) | Dgkd | E9PUQ8 | 3 |
| Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta) | Dgkz | Q80UP3 | 3 |
| Digestive organ expansion factor homolog | Diexf Def | Q8BTT6 | 3 |
| Dimethylaniline monooxygenase [N-oxide-forming] 3 (EC 1.14.13.8) (Dimethylaniline oxidase 3) (Hepatic flavin-containing monooxygenase 3) (FMO 3) (Trimethylamine monooxygenase) (EC 1.14.13.148) | Fmo3 | P97501 | 3 |
| Dipeptidyl peptidase 2 (EC 3.4.14.2) (Dipeptidyl aminopeptidase II) (Dipeptidyl peptidase 7) (Dipeptidyl peptidase II) (DPP II) (Quiescent cell proline dipeptidase) | Dpp7 Dpp2 Qpp | Q9ET22 | 3 |
| Disks large homolog 1 | Dlg1 | S4R2T8 | 3 |
| Disks large homolog 3 | Dlg3 | A2BEF2 | 3 |
| DmX-like protein 2 (Rabconnectin-3) | Dmxl2 Kiaa0856 | Q8BPN8 | 3 |
| DNA dC->dU-editing enzyme APOBEC-3 (EC 3.5.4.-) (Apolipoprotein B mRNA-editing complex 3) (Arp3) (CEM-15) (CEM15) | Apobec3 | Q99J72 | 3 |
| DNA helicase B (EC 3.6.4.12) | Helb | Q6NVF4 | 3 |