| Dihydropyrimidinase-related protein 3 (Fragment) | Dpysl3 | D3YUS0 | 1 |
| Dihydropyrimidinase-related protein 4 (DRP-4) (Collapsin response mediator protein 3) (CRMP-3) (UNC33-like phosphoprotein 4) (ULIP-4) | Dpysl4 Crmp3 Ulip4 | O35098 | 1 |
| Dihydropyrimidinase-related protein 5 (DRP-5) (Collapsin response mediator protein 5) (CRMP-5) | Dpysl5 Crmp5 | Q9EQF6 | 1 |
| Dihydroxyacetone phosphate acyltransferase (DAP-AT) (DHAP-AT) (EC 2.3.1.42) (Acyl-CoA:dihydroxyacetonephosphateacyltransferase) (Glycerone-phosphate O-acyltransferase) | Gnpat Dhapat | P98192 | 1 |
| Dihydroxyacetone phosphate acyltransferase (Gnpat protein) (Fragment) | Gnpat | Q05DV2 | 1 |
| Dimethylarginine dimethylaminohydrolase 1, isoform CRA_a (N(G),N(G)-dimethylarginine dimethylaminohydrolase 1) | Ddah1 mCG_7778 | D3YU15 | 1 |
| Dimethylarginine dimethylaminohydrolase 2, isoform CRA_a (N(G),N(G)-dimethylarginine dimethylaminohydrolase 2) (Putative uncharacterized protein) | Ddah2 mCG_15913 | O08972 | 1 |
| Dipeptidyl aminopeptidase-like protein 6 (DPPX) (Dipeptidyl aminopeptidase-related protein) (Dipeptidyl peptidase 6) (Dipeptidyl peptidase IV-like protein) (Dipeptidyl peptidase VI) (DPP VI) | Dpp6 Dpp-6 | Q9Z218 | 1 |
| Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP-1) (muDIPP1) (EC 3.6.1.52) (Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase 1) (EC 3.6.1.-) (Nucleoside diphosphate-linked moiety X motif 3) (Nudix motif 3) | Nudt3 Dipp Dipp1 | Q9JI46 | 1 |
| Diphthine--ammonia ligase (EC 6.3.1.14) (ATP-binding domain-containing protein 4) (Diphthamide synthase) (Diphthamide synthetase) (Protein DPH6 homolog) | Dph6 Atpbd4 | Q9CQ28 | 1 |
| Disabled homolog 2 | Dab2 | E0CXT5 | 1 |
| Disabled homolog 2 | Dab2 | E9QL31 | 1 |
| Disabled homolog 2 (Fragment) | Dab2 | F6TQN9 | 1 |
| Disabled homolog 2 (Putative uncharacterized protein) | Dab2 | Q9DCE6 | 1 |
| Disabled homolog 2-interacting protein | Dab2ip | A2AUX3 | 1 |
| Disabled homolog 2-interacting protein | Dab2ip | A2AUX5 | 1 |
| Disabled homolog 2-interacting protein | Dab2ip | B7ZD29 | 1 |
| Disabled homolog 2-interacting protein (DAB2-interacting protein) (ASK-interacting protein 1) (DOC-2/DAB-2 interactive protein) | Dab2ip Kiaa1743 | Q3UHC7 | 1 |
| Disabled homolog 2-interacting protein (Fragment) | Dab2ip | F6RK07 | 1 |
| Disabled homolog 2-interacting protein (Fragment) | Dab2ip | F6QQP6 | 1 |
| Disco-interacting protein 2 homolog A | Dip2a | D3Z7D3 | 1 |
| Disintegrin and metalloproteinase domain-containing protein 12 (Fragment) | Adam12 | F6YWH6 | 1 |
| Disintegrin and metalloproteinase domain-containing protein 19 (ADAM 19) (EC 3.4.24.-) (Meltrin-beta) | Adam19 Mltnb | O35674 | 1 |
| Disintegrin and metalloproteinase domain-containing protein 8 (ADAM 8) (EC 3.4.24.-) (Cell surface antigen MS2) (Macrophage cysteine-rich glycoprotein) (CD antigen CD156a) | Adam8 Ms2 | Q05910 | 1 |
| Disks large homolog 1 | Dlg1 | E9Q9H0 | 1 |
| Disks large homolog 1 | Dlg1 | D3Z3B8 | 1 |
| Disks large homolog 3 (Synapse-associated protein 102) (SAP-102) (SAP102) | Dlg3 Dlgh3 | P70175 | 1 |
| Disks large-associated protein 4 | Dlgap4 | I1E4X0 | 1 |
| Disks large-associated protein 4 (DAP-4) (PSD-95/SAP90-binding protein 4) (SAP90/PSD-95-associated protein 4) (SAPAP-4) | Dlgap4 Kiaa0964 Sapap4 | B1AZP2 | 1 |
| Disks large-associated protein 4 (Dlgap4 protein) | Dlgap4 | B7ZNS2 | 1 |
| Disks large-associated protein 5 (DAP-5) (Discs large homolog 7) (Disks large-associated protein DLG7) (Hepatoma up-regulated protein homolog) (HURP) | Dlgap5 Dlg7 Kiaa0008 | Q8K4R9 | 1 |
| Disrupted in renal carcinoma protein 2 homolog | Dirc2 | Q8BFQ6 | 1 |
| Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) (EC 2.5.1.87) | Dhdds | A3KGL0 | 1 |
| Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) (EC 2.5.1.87) (Fragment) | Dhdds | A3KGL3 | 1 |
| DmX-like protein 2 | Dmxl2 | B0V2P5 | 1 |
| DNA (cytosine-5)-methyltransferase (EC 2.1.1.37) | Dnmt1 | J3QNW0 | 1 |
| DNA (cytosine-5)-methyltransferase 3-like | Dnmt3l | Q9CWR8 | 1 |
| DNA (cytosine-5)-methyltransferase 3A (Fragment) | Dnmt3a | G3UXY2 | 1 |
| DNA damage-inducible transcript 3 protein (DDIT-3) (C/EBP zeta) (C/EBP-homologous protein) (CHOP) (C/EBP-homologous protein 10) (CHOP-10) (CCAAT/enhancer-binding protein homologous protein) (Growth arrest and DNA-damage-inducible protein GADD153) | Ddit3 Chop Chop10 Gadd153 | P35639 | 1 |
| DNA damage-regulated autophagy modulator protein 2 (Fragment) | Dram2 | D3Z6B7 | 1 |
| DNA dC->dU-editing enzyme APOBEC-3 | Apobec3 | H3BJQ3 | 1 |
| DNA ligase (EC 6.5.1.1) | Lig3 mCG_8187 | B1AT03 | 1 |
| DNA ligase (EC 6.5.1.1) | Lig3 | K4DI59 | 1 |
| DNA ligase (EC 6.5.1.1) | Lig3 | Q3UC82 | 1 |
| DNA mismatch repair protein Mlh1 (MutL protein homolog 1) | Mlh1 | Q9JK91 | 1 |
| DNA nucleotidylexotransferase (EC 2.7.7.31) (Terminal addition enzyme) (Terminal deoxynucleotidyltransferase) (TDT) (Terminal transferase) | Dntt Tdt | P09838 | 1 |
| DNA polymerase delta subunit 3 (DNA polymerase delta subunit p66) | Pold3 | Q9EQ28 | 1 |
| DNA polymerase delta subunit 3 (Polymerase (DNA-directed), delta 3, accessory subunit) (Putative uncharacterized protein) | Pold3 | Q8BH76 | 1 |
| DNA polymerase eta (EC 2.7.7.7) (RAD30 homolog A) (Xeroderma pigmentosum variant type protein homolog) | Polh Rad30a Xpv | Q9JJN0 | 1 |
| DNA primase (EC 2.7.7.-) | Prim1 | J3QN19 | 1 |
| DNA repair and recombination protein RAD54-like (EC 3.6.4.-) (RAD54 homolog) (mHR54) (mRAD54) | Rad54l Rad54 | P70270 | 1 |
| DNA repair protein RAD51 homolog 1 | Rad51 | D6RCK1 | 1 |
| DNA repair protein RAD51 homolog 1 (RAD51 homolog A) | Rad51 Rad51a Reca | Q08297 | 1 |
| DNA replication licensing factor MCM7 | Mcm7 | D3Z6N3 | 1 |
| DNA segment, Chr 2, ERATO Doi 750, expressed, isoform CRA_c (Small kinetochore-associated protein) (Fragment) | Knstrn D2Ertd750e mCG_6532 | A3KGG6 | 1 |
| DNA segment, Chr 6, Wayne State University 176, expressed, isoform CRA_a (Protein FAM3C) | Fam3c D6Wsu176e mCG_9383 | G3X9I1 | 1 |
| DNA topoisomerase (EC 5.99.1.2) (Fragment) | Top3b | D3Z084 | 1 |
| DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Fragment) | Apex1 | D3Z124 | 1 |
| DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Fragment) | Apex1 | F6QA74 | 1 |
| DNA-binding protein RFX8 (Regulatory factor X 8) | Rfx8 | D3YU81 | 1 |
| DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1) | Satb1 | Q60611 | 1 |
| DNA-binding protein SMUBP-2 (EC 3.6.4.12) (EC 3.6.4.13) (ATP-dependent helicase IGHMBP2) (Cardiac transcription factor 1) (CATF1) (Immunoglobulin mu-binding protein 2) | Ighmbp2 Smbp-2 Smbp2 | P40694 | 1 |
| DNA-directed RNA polymerase (EC 2.7.7.6) | Polrmt | E9PWD9 | 1 |
| DNA-directed RNA polymerase I subunit RPA2 | Polr1b | A2AP84 | 1 |
| DNA-directed RNA polymerase II subunit RPB11 (Polymerase (RNA) II (DNA directed) polypeptide J) | Polr2j mCG_1879 | Q6PI63 | 1 |
| DNA-directed RNA polymerase II subunit RPB3 (RNA polymerase II subunit 3) (RNA polymerase II subunit B3) (DNA-directed RNA polymerase II 33 kDa polypeptide) (RPB33) (DNA-directed RNA polymerase II subunit C) (RPB31) | Polr2c Rpo2-3 | Q99M46 | 1 |
| DNA-directed RNA polymerase subunit (EC 2.7.7.6) | Polr2a | A0A0R4J0V5 | 1 |
| DNA-directed RNA polymerase, mitochondrial (MtRPOL) (EC 2.7.7.6) | Polrmt | Q8BKF1 | 1 |
| DNA-directed RNA polymerases I and III subunit RPAC1 | Polr1c | D3Z3D6 | 1 |
| DNA-directed RNA polymerases I and III subunit RPAC1 (Fragment) | Polr1c | D3Z7Q8 | 1 |
| DnaJ (Hsp40) homolog, subfamily B, member 12, isoform CRA_d (DnaJ homolog subfamily B member 12) (Putative uncharacterized protein) | Dnajb12 mCG_11302 | Q8C4C9 | 1 |
| DnaJ (Hsp40) homolog, subfamily C, member 19, isoform CRA_c (Mitochondrial import inner membrane translocase subunit TIM14) | Dnajc19 mCG_15246 | G3X8S1 | 1 |
| DnaJ (Hsp40) homolog, subfamily C, member 5, isoform CRA_b (DnaJ homolog subfamily C member 5) | Dnajc5 mCG_23060 | G5E8T0 | 1 |
| DnaJ heat shock protein family (Hsp40) member C13 (Receptor mediated endocytosis-8) | Dnajc13 RME-8 | D4AFX7 | 1 |
| DnaJ homolog subfamily B member 12 (mDj10) | Dnajb12 | Q9QYI4 | 1 |
| DnaJ homolog subfamily B member 6 (Fragment) | Dnajb6 | F6YRQ2 | 1 |
| DnaJ homolog subfamily C member 11 | Dnajc11 | E9Q8B3 | 1 |
| DnaJ homolog subfamily C member 15 | Dnajc15 Dnajd1 | Q78YY6 | 1 |
| DnaJ homolog subfamily C member 2 | Dnajc2 | E9Q9H3 | 1 |
| DnaJ homolog subfamily C member 8 | Dnajc8 | A2ALF0 | 1 |
| DnaJ homolog subfamily C member 8 | Dnajc8 | A2ALF3 | 1 |
| DnaJ homolog subfamily C member 8 (Fragment) | Dnajc8 | F6TQL3 | 1 |
| Dock10 protein | Dock10 | B2RWY0 | 1 |
| Dolichol-phosphate mannosyltransferase subunit 1 | Dpm1 | A2BDX2 | 1 |
| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B | Stt3b | A0A0R4J0D3 | 1 |
| Dolichyl-phosphate beta-glucosyltransferase (DolP-glucosyltransferase) (EC 2.4.1.117) (Asparagine-linked glycosylation protein 5 homolog) | Alg5 | Q9DB25 | 1 |
| Double-stranded RNA-binding protein Staufen homolog 1 | Stau1 | A2A5S3 | 1 |
| Double-stranded RNA-binding protein Staufen homolog 1 | Stau1 | V9GX87 | 1 |
| Double-stranded RNA-binding protein Staufen homolog 1 (Putative uncharacterized protein) (Staufen (RNA binding protein) homolog 1 (Drosophila)) (Staufen (RNA binding protein) homolog 1 (Drosophila), isoform CRA_a) (Staufen isoform I2) | Stau1 mCG_14603 | Q9DBE7 | 1 |
| Double-stranded RNA-binding protein Staufen homolog 2 | Stau2 | Q8CJ67 | 1 |
| Dual specificity phosphatase 19 (Dual specificity phosphatase 19, isoform CRA_a) (Dual-specificity phosphatase TS-DSP1) (Dual-specificity protein phosphatase 19) (Protein phosphatase) (Putative uncharacterized protein) | Dusp19 mCG_11093 | Q99N12 | 1 |
| Dual specificity phosphatase 22, isoform CRA_b (Dual-specificity protein phosphatase 22) | Dusp22 mCG_4920 | Z4YL33 | 1 |
| Dual specificity protein kinase CLK4 (EC 2.7.12.1) (CDC-like kinase 4) | Clk4 | O35493 | 1 |
| Dual specificity protein kinase TTK (EC 2.7.12.1) (ESK) (PYT) | Ttk Esk | P35761 | 1 |
| Dual specificity protein phosphatase 1 (EC 3.1.3.16) (EC 3.1.3.48) (Mitogen-activated protein kinase phosphatase 1) (MAP kinase phosphatase 1) (MKP-1) (Protein-tyrosine phosphatase 3CH134) (Protein-tyrosine phosphatase ERP) | Dusp1 3ch134 Mkp1 Ptpn10 Ptpn16 | P28563 | 1 |
| Dual specificity protein phosphatase 13 isoform A (DUSP13A) (EC 3.1.3.16) (EC 3.1.3.48) (Muscle-restricted DSP) | Dusp13 Dusp13a Mdsp | Q6B8I0 | 1 |
| Dual specificity protein phosphatase 19 (EC 3.1.3.16) (EC 3.1.3.48) (Protein phosphatase SKRP1) (Stress-activated protein kinase pathway-regulating phosphatase 1) | Dusp19 Skrp1 | Q8K4T5 | 1 |
| Dual-specificity mitogen-activated protein kinase kinase 6 | Map2k6 | A2AGS2 | 1 |
| Dual-specificity protein phosphatase 3 | Dusp3 | B1AQF4 | 1 |
| Dual-specificity protein phosphatase 3 | Dusp3 | H3BKL8 | 1 |