| Lipoprotein | B195_02338 | M5QLM8 | 1 |
| Lipoprotein | B195_02998 | M5QML9 | 1 |
| Lipoprotein | B195_03688 | M5QMD7 | 1 |
| Lipoprotein | B195_00170 | M5QN82 | 1 |
| Lipoprotein | B195_00455 | M5QP25 | 1 |
| Lipoprotein | B195_00655 | M5QP59 | 1 |
| Lipoprotein | AC1_0942 | B1R4P9 | 1 |
| Lipoprotein | ABC-SBP spr0147 | Q8DRG1 | 1 |
| Lipoprotein | lmb spr0906 | Q8DQ09 | 1 |
| Lipoprotein | gna1946 | Q9K360 | 1 |
| Lipoprotein | NGK_2309 | B4RPN6 | 1 |
| Lipoprotein | NGK_1545 | B4RN35 | 1 |
| Lipoprotein | AB237_2857 | A0A0E1PU56 | 1 |
| Lipoprotein | SC1083_2043 | G4AB13 | 1 |
| Lipoprotein | OOM_1553 | I2B0J3 | 1 |
| Lipoprotein | yaeC SCH_0244 | Q57T11 | 1 |
| Lipoprotein | nlpD SCH_2857 | Q57KJ9 | 1 |
| Lipoprotein | SAOUHSC_00844 | Q2FZZ0 | 1 |
| Lipoprotein | SAOUHSC_00426 | Q2G0V0 | 1 |
| Lipoprotein | KW89_2077 | A0A0K2DYY7 | 1 |
| Lipoprotein | KW89_2834 | A0A0K2E141 | 1 |
| Lipoprotein | KU39_1693 | A0A0K2L3X8 | 1 |
| Lipoprotein | FTT_1591 | Q5NEN3 | 1 |
| Lipoprotein | LMRG_00058 | A0A0H3G9T8 | 1 |
| Lipoprotein (Putative lipoprotein) | FSU_0609 | A7UG51 | 1 |
| Lipoprotein HlpB | SC1083_0834 | G4A7N8 | 1 |
| Lipoprotein HlpB, chromosome segregation ATPase | hlpB HPSD74_0034 | U4SMX0 | 1 |
| Lipoprotein LpqH (19 kDa lipoprotein antigen) (Putative transporter LpqH) (p19) | lpqH Rv3763 MTV025.111 | P9WK61 | 1 |
| Lipoprotein LprA | lprA Rv1270c MTCY50.12 | P9WK55 | 1 |
| Lipoprotein MxiM | mxiM CP0143 | P0A1X2 | 1 |
| Lipoprotein NlpE (Copper homeostasis protein CutF) | nlpE cutF b0192 JW0188 | P40710 | 1 |
| Lipoprotein NlpI | VC_0648 | Q9KU75 | 1 |
| Lipoprotein NlpI | VS_2477 | B7VJH2 | 1 |
| Lipoprotein PG3 | PG_2054 | F5HAC9 | 1 |
| Lipoprotein protein, putative | PG_1215 | Q7MV75 | 1 |
| Lipoprotein releasing system, subunit C,putative membrane protein | lolC FTT_0404 | Q5NHP3 | 1 |
| Lipoprotein VacJ | SC1083_2012 | G4AAY2 | 1 |
| Lipoprotein, BMP family | AC1_1980 | B1R4Z6 | 1 |
| Lipoprotein, putative | PG_0180 | Q7MXK1 | 1 |
| Lipoprotein, putative | PG_0183 | Q7MXJ8 | 1 |
| Lipoprotein, putative | PG_0241 | Q7MXF4 | 1 |
| Lipoprotein, putative | PG_0611 | Q7MWJ9 | 1 |
| Lipoprotein, putative | PG_0698 | Q7MWD0 | 1 |
| Lipoprotein, putative | PG_0726 | Q7MWA5 | 1 |
| Lipoprotein, putative | PG_0906 | Q7MVX0 | 1 |
| Lipoprotein, putative | PG_1713 | Q7MU51 | 1 |
| Lipoprotein, putative | PG_1948 | Q7MTK3 | 1 |
| Lipoprotein, putative | PG_2155 | Q7MT39 | 1 |
| Lipoprotein, putative | VC_1195 | Q9KSR1 | 1 |
| Lipoprotein, putative | VC_2298 | Q9KPR8 | 1 |
| Lipoprotein, putative | SC1083_1460 | G4A9E6 | 1 |
| Lipoprotein, putative | SC1083_1676 | G4AA03 | 1 |
| Lipoprotein-related protein | VC_1064 | Q9KT41 | 1 |
| Lipoprotein-releasing system ATP-binding protein LolD (EC 3.6.3.-) | lolD SSON_1137 | Q3Z300 | 1 |
| Lipoprotein-releasing system ATP-binding protein LolD (EC 3.6.3.-) | lolD OOM_1067 | I2AZB5 | 1 |
| Lipoprotein-releasing system ATP-binding protein LolD (EC 3.6.3.-) | lolD FTT_0405 | Q5NHP2 | 1 |
| Lipoteichoic acid synthase [Cleaved into: Glycerol phosphate lipoteichoic acid synthase (LTA synthase) (EC 2.7.8.-) (Polyglycerol phosphate synthase); Processed glycerol phosphate lipoteichoic acid synthase] | ltaS MW0681 | Q7A1I3 | 1 |
| Lipoteichoic acid synthase [Cleaved into: Glycerol phosphate lipoteichoic acid synthase (LTA synthase) (EC 2.7.8.-) (Polyglycerol phosphate synthase); Processed glycerol phosphate lipoteichoic acid synthase] | ltaS yfnI SAOUHSC_00728 | Q2G093 | 1 |
| Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA) | lipA PA3996 | Q9HX25 | 1 |
| Lmo0153 protein | lmo0153 | Q8YAH3 | 1 |
| Lmo0241 protein | lmo0241 | Q92F34 | 1 |
| Lmo0330 protein | lmo0330 | Q8YA35 | 1 |
| Lmo0640 protein | lmo0640 | Q8Y993 | 1 |
| Lmo0722 protein | lmo0722 | Q8Y920 | 1 |
| Lmo0781 protein | lmo0781 | Q8Y8W1 | 1 |
| Lmo0796 protein | lmo0796 | Q8Y8U6 | 1 |
| Lmo0945 protein | lmo0945 | Q8Y8F9 | 1 |
| Lmo0953 protein | lmo0953 | Q8Y8F1 | 1 |
| Lmo1056 protein | lmo1056 | Q8Y861 | 1 |
| Lmo1059 protein | lmo1059 | Q8Y859 | 1 |
| Lmo1084 protein | lmo1084 | Q8Y834 | 1 |
| Lmo1257 protein | lmo1257 | Q92CE7 | 1 |
| Lmo1261 protein | lmo1261 | Q8Y7L6 | 1 |
| Lmo1323 protein | lmo1323 | Q8Y7F8 | 1 |
| Lmo1372 protein | lmo1372 | Q8Y7B4 | 1 |
| Lmo1423 protein | lmo1423 | Q8Y774 | 1 |
| Lmo1694 protein | lmo1694 | Q8Y6J0 | 1 |
| Lmo1721 protein | lmo1721 | Q8Y6G6 | 1 |
| Lmo1815 protein | lmo1815 | Q92AJ3 | 1 |
| Lmo2463 protein | lmo2463 | Q8Y4H8 | 1 |
| Lmo2673 protein | lmo2673 | Q8Y405 | 1 |
| Lmo2707 protein | lmo2707 | Q8Y3X2 | 1 |
| Lmo2829 protein | lmo2829 | Q8Y3K6 | 1 |
| Lon protease (EC 3.4.21.53) (ATP-dependent protease La) | capR lon YPO3155 | Q0WCC8 | 1 |
| Lon protease (EC 3.4.21.53) (ATP-dependent protease La) | lon SC1083_1098 | G4A8F0 | 1 |
| Lon protease (EC 3.4.21.53) (ATP-dependent protease La) | lon KPR_4318 | R4YEB6 | 1 |
| Lon protease (EC 3.4.21.53) (ATP-dependent protease La) | lon HPSD74_1117 | U4SI84 | 1 |
| Lon protease (EC 3.4.21.53) (ATP-dependent protease La) | lon Smlt0991 | B2FQR4 | 1 |
| Lon protease (EC 3.4.21.53) (ATP-dependent protease La) | lon SCH_0492 | Q57SB3 | 1 |
| Lon protease (EC 3.4.21.53) (ATP-dependent protease La) | lon KW89_842 | A0A0K2DVD2 | 1 |
| Long chain fatty acid CoA ligase | fadD FTN_1436 | A0Q7T9 | 1 |
| Long chain fatty acid CoA ligase (EC 6.2.1.3) | fadD2 FTT_1528 | Q5NET4 | 1 |
| Long-chain fatty acid transport protein | fadL ETAE_2451 | D0ZB52 | 1 |
| Long-chain fatty acid transport protein | VS_0861 | B7VL43 | 1 |
| Long-chain fatty acid transport protein | VS_II0773 | B7VS24 | 1 |
| Long-chain fatty acid transport protein (Outer membrane FadL protein) (Outer membrane flp protein) | fadL SF2421 S2557 | P59741 | 1 |
| Long-chain fatty acid transport protein (Outer membrane flp protein) | fadL KPN_02726 | A6TC22 | 1 |
| Long-chain-fatty-acid--CoA ligase | fadD2 PA3300 | Q9HYU3 | 1 |
| Long-chain-fatty-acid--CoA ligase FadD13 (EC 6.2.1.3) (Fatty acyl-CoA ligase) (FACL) (FACL13) (Fatty acyl-CoA synthetase) (ACS) (FACS) (Very-long-chain fatty-acyl-CoA synthetase) (ACSVL) | fadD13 Rv3089 | P9WQ37 | 1 |
| Lost Adherence Sensor, LadS | ladS PA3974 | Q9HX42 | 1 |