| Preprotein translocase family protein | OOM_1305 | I2AZX2 | 1 |
| Preprotein translocase family protein | yajC FTT_1116c | Q5NFV2 | 1 |
| Preprotein translocase IISP family, membrane subunit | yajC SCH_0448 | Q57SF7 | 1 |
| Preprotein translocase subunit YajC | yajC VSAK1_14287 | A6D751 | 1 |
| Preprotein translocase, YajC subunit | yajC HPSD74_1448 | U4SIU4 | 1 |
| Preprotein translocase, yajc subunit | CD630_28010 | Q183N6 | 1 |
| Preprotein translocase, YajC subunit | SAOUHSC_01747 | Q2FXT7 | 1 |
| Primosomal protein N' (EC 3.6.4.-) (ATP-dependent helicase PriA) | priA Fphi_0636 | B0U139 | 1 |
| Primosomal protein N' (EC 3.6.4.-) (ATP-dependent helicase PriA) | priA spr1581 | Q8DNR6 | 1 |
| Primosomal protein N' (EC 3.6.4.-) (ATP-dependent helicase PriA) | priA yloJ BSU15710 | P94461 | 1 |
| Primosomal protein N' (EC 3.6.4.-) (ATP-dependent helicase PriA) | priA SPy_1629 | Q99YM6 | 1 |
| PrkA family serine protein kinase | B195_13915 | M5QTP0 | 1 |
| Probable 2-OH-lauroyltransferase | PA0011 | Q9I7B5 | 1 |
| Probable 3-hydroxyacyl-thioester dehydratase HtdY | htdY Rv3389c | I6YBZ8 | 1 |
| Probable 3-oxoacyl-[acyl-carrier protein] reductase FabG4 (3-ketoacyl-acyl carrier protein reductase) | fabG4 Rv0242c | I6Y778 | 1 |
| Probable 6-phosphogluconate dehydrogenase,decarboxylating Gnd2 | gnd2 Rv1122 | O06574 | 1 |
| Probable ABC transporter ATP-binding protein PEB1C | peb1C pebC Cj0922c | Q0P9X7 | 1 |
| Probable ABC transporter ATP-binding protein SPy_0285/M5005_Spy0242 | SPy_0285 M5005_Spy0242 | Q9A1G5 | 1 |
| Probable acetyl-/propionyl-CoA carboxylase (Beta subunit) AccD1 | accD1 Rv2502c | I6YDK7 | 1 |
| Probable acetyl-CoA acetyltransferase (EC 2.3.1.9) (Acetoacetyl-CoA thiolase) | fadA4 Rv1323 MTCY130.08 | P9WG69 | 1 |
| Probable acetyl-CoA acetyltransferase FadA6 (Acetoacetyl-CoA thiolase) | fadA6 Rv3556c | I6XHJ3 | 1 |
| Probable acetyl-CoA acyltransferase FadA2 (3-ketoacyl-CoA thiolase) (Beta-ketothiolase) | fadA2 Rv0243 | O86361 | 1 |
| Probable acetyltransferase | PA4026 | Q9HX01 | 1 |
| Probable acetyltransferase | VSAK1_19859 | A6CWQ2 | 1 |
| Probable acid stress chaperone HdeA | hdeA B195_17554 | M5QDZ3 | 1 |
| Probable acrylyl-CoA reductase AcuI (EC 1.3.1.84) (Acryloyl-coenzyme A reductase AcuI) | acuI yhdH b3253 JW3222 | P26646 | 1 |
| Probable acyl-CoA dehydrogenase | PA2552 | Q9I0T2 | 1 |
| Probable acyl-CoA dehydrogenase | PA0746 | Q9I5I3 | 1 |
| Probable acyl-CoA dehydrogenase | PA4435 | Q9HVY0 | 1 |
| Probable acyl-CoA dehydrogenase | PA0508 | Q9I610 | 1 |
| Probable acyl-CoA dehydrogenase | PA4199 | Q9HWI2 | 1 |
| Probable acyl-CoA dehydrogenase fadE25 (EC 1.3.99.-) | fadE25 acd Rv3274c MTCY71.14c | P9WQG1 | 1 |
| Probable acyl-CoA dehydrogenase FadE4 | fadE4 Rv0231 | P96414 | 1 |
| Probable acyl-CoA dehydrogenase FadE8 | fadE8 Rv0672 | I6X9J0 | 1 |
| Probable acyl-CoA thioesterase II TesB2 (TEII) | tesB2 Rv2605c | I6X4S7 | 1 |
| Probable acyltransferase YihG (EC 2.3.-.-) | yihG b3862 JW3834 | P32129 | 1 |
| Probable alanine rich hydrolase | Rv2765 | I6XF92 | 1 |
| Probable aldehyde dehydrogenase | PA1601 | Q9I3C0 | 1 |
| Probable aldehyde dehydrogenase | PA0747 | Q9I5I2 | 1 |
| Probable aldehyde dehydrogenase | PA4899 | Q9HUR4 | 1 |
| Probable aldehyde dehydrogenase AldC | aldC Rv2858c | O33340 | 1 |
| Probable allantoicase (EC 3.5.3.4) (Allantoate amidinohydrolase) | alc B195_08827 | M5R0N5 | 1 |
| Probable amino-acid ABC transporter binding protein | NTHI1243 | Q4QLK8 | 1 |
| Probable aminopeptidase N PepN (Lysyl aminopeptidase) (LYS-AP) (Alanine aminopeptidase) | pepN Rv2467 | L7N655 | 1 |
| Probable aminotransferase | PA4715 | Q9HV83 | 1 |
| Probable aminotransferase | PA2828 | Q9I015 | 1 |
| Probable AMP-binding enzyme | PA2557 | Q9I0S7 | 1 |
| Probable asparagine synthetase | PA2084 | Q9I231 | 1 |
| Probable ATP-binding component of ABC transporter | PA4223 | Q9HWG6 | 1 |
| Probable ATP-binding component of ABC transporter | PA4222 | Q9HWG7 | 1 |
| Probable ATP-binding component of ABC transporter | PA2329 | Q9I1E9 | 1 |
| Probable ATP-binding component of ABC transporter | PA2812 | Q9I031 | 1 |
| Probable ATP-binding component of ABC transporter | PA3019 | Q9HZI7 | 1 |
| Probable ATP-binding component of ABC transporter | PA3672 | Q9HXW8 | 1 |
| Probable ATP-binding component of ABC transporter | PA5074 | Q9HUA9 | 1 |
| Probable ATP-binding component of ABC transporter | PA5252 | Q9HTU2 | 1 |
| Probable ATP-binding component of ABC transporter | PA5376 | Q9HTI8 | 1 |
| Probable bacteriophage integrase | PA0728 | Q9I5K0 | 1 |
| Probable beta-ketoacyl CoA thiolase FadA3 | fadA3 Rv1074c | O53422 | 1 |
| Probable bifunctional protein acetyl-/propionyl-coenzyme A carboxylase (Alpha chain) AccA3: biotin carboxylase + biotin carboxyl carrier protein (BCCP) | accA3 Rv3285 | P96890 | 1 |
| Probable binding protein component of ABC transporter | PA0604 | Q9I5T4 | 1 |
| Probable binding protein component of ABC transporter | PA4496 | Q9HVS5 | 1 |
| Probable binding protein component of ABC transporter | PA4913 | Q9HUQ0 | 1 |
| Probable biotin carboxylase subunit of a transcarboxylase | PA5436 | Q9HTD0 | 1 |
| Probable carbamoyl transferase | PA2069 | Q9I246 | 1 |
| Probable cation efflux system protein | PA0397 | Q9I6A3 | 1 |
| Probable cell wall amidase LytH (EC 3.5.1.-) | lytH SAOUHSC_01739 | Q2FXU3 | 1 |
| Probable chemotaxis transducer | PA2788 | Q9I055 | 1 |
| Probable chemotaxis transducer | PA2654 | Q9I0I4 | 1 |
| Probable chemotaxis transducer | PA2867 | Q9HZX9 | 1 |
| Probable chemotaxis transducer | PA4290 | Q9HWB0 | 1 |
| Probable chemotaxis transducer | PA4520 | Q9HVQ2 | 1 |
| Probable choline transporter | PA5291 | Q9HTR3 | 1 |
| Probable conserved lipoprotein LpqN | lpqN Rv0583c | O53780 | 1 |
| Probable conserved membrane protein | Rv3587c | O53572 | 1 |
| Probable conserved proline, glycine, valine-rich secreted protein | Rv1435c | O06823 | 1 |
| Probable conserved secreted protein TB22.2 | TB22.2 Rv3036c | I6YF08 | 1 |
| Probable cutinase cut2 (EC 3.1.1.74) | cut2 Rv2301 MTCY339.08c | P9WP41 | 1 |
| Probable cutinase Rv1984c (EC 3.1.1.74) | Rv1984c MTCY39.35 | P9WP43 | 1 |
| Probable cyclic di-GMP phosphodiesterase PdeG (EC 3.1.4.52) | pdeG ycgG b1168 JW5174 | P75995 | 1 |
| Probable cyclic di-GMP phosphodiesterase PdeI (EC 3.1.4.52) | pdeI yliE b0833 JW0817 | P75800 | 1 |
| Probable cystathionine gamma-lyase | PA0400 | Q9I6A0 | 1 |
| Probable cysteine desulfurase (EC 2.8.1.7) | csd Rv1464 MTV007.11 | P9WQ69 | 1 |
| Probable cystine transporter YijE | yijE b3943 JW5557 | P0ABT8 | 1 |
| Probable cytochrome c | PA2266 | Q9I1K7 | 1 |
| Probable cytosol aminopeptidase | SAOUHSC_00879 | Q2FZV6 | 1 |
| Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase) | pepA Fphi_0161 | B0TYL7 | 1 |
| Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase) | pepA FTN_0660 | A0Q5N7 | 1 |
| Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase) | pepA B195_05536 | M5QZ22 | 1 |
| Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase) | pepA YPO3441 y0746 YP_0643 | Q8ZBH3 | 1 |
| Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase) | pepA SSON_4445 | Q3YU89 | 1 |
| Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase) | pepA yuiE BSU32050 | O32106 | 1 |
| Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase) | pepA Smlt0675 | B2FMS4 | 1 |
| Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase) | pepA OOM_1247 | I2AZS2 | 1 |
| Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase) | pepA FTT_1318c | Q5NFC1 | 1 |
| Probable diguanylate cyclase YegE (DGC) (EC 2.7.7.65) | yegE b2067 JW2052 | P38097 | 1 |
| Probable dipeptidase A (EC 3.4.-.-) | pepDA pepD SPy_0713 M5005_Spy0542 | Q9A0M0 | 1 |
| Probable DNA-directed RNA polymerase subunit delta (RNAP delta factor) | rpoE SPy_1895 M5005_Spy1611 | P66719 | 1 |
| Probable DNA-directed RNA polymerase subunit delta (RNAP delta factor) | rpoE SAOUHSC_02369 | Q2FWD0 | 1 |
| Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase) | rlmN MW1101 | Q8NX16 | 1 |