| Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase) | rlmN SPy_1533 M5005_Spy1261 | Q99YU5 | 1 |
| Probable enoyl-CoA hydratase EchA1 (Enoyl hydrase) (Unsaturated acyl-CoA hydratase) (Crotonase) | echA1 Rv0222 | P96404 | 1 |
| Probable enoyl-CoA hydratase EchA15 (Enoyl hydrase) (Unsaturated acyl-CoA hydratase) (Crotonase) | echA15 Rv2679 | I6YA03 | 1 |
| Probable enoyl-CoA hydratase EchA16 (Enoyl hydrase) (Unsaturated acyl-CoA hydratase) (Crotonase) | echA16 Rv2831 | I6YEH6 | 1 |
| Probable enoyl-CoA hydratase EchA3 (Enoyl hydrase) (Unsaturated acyl-CoA hydratase) (Crotonase) | echA3 Rv0632c | I6Y8B5 | 1 |
| Probable enoyl-CoA hydratase EchA5 (Enoyl hydrase) (Unsaturated acyl-CoA hydratase) (Crotonase) | echA5 Rv0675 | I6Y4E8 | 1 |
| Probable enoyl-CoA hydratase echA8 (EC 4.2.1.17) | echA8 Rv1070c MTV017.23c | P9WNN9 | 1 |
| Probable enoyl-CoA hydratase/isomerase | PA0744 | Q9I5I5 | 1 |
| Probable FAD-dependent monooxygenase | PA5221 | Q9HTW9 | 1 |
| Probable fatty oxidation protein FadB | fadB Rv0860 | O53872 | 1 |
| Probable ferredoxin | PA4772 | Q9HV36 | 1 |
| Probable ferredoxin FdxC | fdxC Rv1177 | O50433 | 1 |
| Probable fructose-6-phosphate aldolase (EC 4.1.2.-) | fsa SPN23F02420 | B8ZKS3 | 1 |
| Probable fructose-bisphosphate aldolase (FBP aldolase) (FBPA) (EC 4.1.2.13) (Fructose-1,6-bisphosphate aldolase) | fbaA fba fba1 tsr BSU37120 | P13243 | 1 |
| Probable glutamate/gamma-aminobutyrate antiporter (Extreme acid sensitivity protein) | gadC acsA xasA Z2216 ECs2097 | P58229 | 1 |
| Probable glutamine synthetase | spuI PA0296 | Q9I6J5 | 1 |
| Probable glutamine synthetase | spuB PA0298 | Q9I6J3 | 1 |
| Probable glutamine synthetase GlnA4 (Glutamine synthase) (GS-II) | glnA4 Rv2860c | I6X5K1 | 1 |
| Probable glutathione S-transferase | PA0473 | Q9I645 | 1 |
| Probable glutathione S-transferase | PA2813 | Q9I030 | 1 |
| Probable glutathione S-transferase | PA2821 | Q9I022 | 1 |
| Probable glycine dehydrogenase (decarboxylating) subunit 1 (EC 1.4.4.2) (Glycine cleavage system P-protein subunit 1) (Glycine decarboxylase subunit 1) (Glycine dehydrogenase (aminomethyl-transferring) subunit 1) | gcvPA Fphi_0338 | B0TZJ6 | 1 |
| Probable glycine dehydrogenase (decarboxylating) subunit 1 (EC 1.4.4.2) (Glycine cleavage system P-protein subunit 1) (Glycine decarboxylase subunit 1) (Glycine dehydrogenase (aminomethyl-transferring) subunit 1) | gcvPA FTN_0507 | A0Q587 | 1 |
| Probable glycine dehydrogenase (decarboxylating) subunit 1 (EC 1.4.4.2) (Glycine cleavage system P-protein subunit 1) (Glycine decarboxylase subunit 1) (Glycine dehydrogenase (aminomethyl-transferring) subunit 1) | gcvPA SAOUHSC_01633 | Q2FY34 | 1 |
| Probable glycine dehydrogenase (decarboxylating) subunit 2 (EC 1.4.4.2) (Glycine cleavage system P-protein subunit 2) (Glycine decarboxylase subunit 2) (Glycine dehydrogenase (aminomethyl-transferring) subunit 2) | gcvPB Fphi_0337 | B0TZJ5 | 1 |
| Probable glycine dehydrogenase (decarboxylating) subunit 2 (EC 1.4.4.2) (Glycine cleavage system P-protein subunit 2) (Glycine decarboxylase subunit 2) (Glycine dehydrogenase (aminomethyl-transferring) subunit 2) | gcvPB FTN_0508 | A0Q588 | 1 |
| Probable glycine dehydrogenase (decarboxylating) subunit 2 (EC 1.4.4.2) (Glycine cleavage system P-protein subunit 2) (Glycine decarboxylase subunit 2) (Glycine dehydrogenase (aminomethyl-transferring) subunit 2) | gcvPB SAOUHSC_01632 | Q2FY35 | 1 |
| Probable GTP-binding protein EngB | engB Sama_0092 | A1S1P8 | 1 |
| Probable GTP-binding protein EngB | engB spr1426 | P64073 | 1 |
| Probable GTP-binding protein EngB | engB yihA b3865 JW5930 | P0A6P7 | 1 |
| Probable GTP-binding protein EngB | engB VSAK1_13231 | A6D9T7 | 1 |
| Probable GTP-binding protein EngB | engB SPy_0886 M5005_Spy0692 | Q9A088 | 1 |
| Probable helicase HelY (EC 3.6.4.-) | helY Rv2092c MTCY49.32c | P9WMR1 | 1 |
| Probable heme utilization protein | PA1302 | Q9I442 | 1 |
| Probable hydrolase | PA1202 | Q9I4D6 | 1 |
| Probable hydrolase | PA0562 | Q9I5X4 | 1 |
| Probable immunoreactive 23 kDa antigen | PGN_0482 | B2RI06 | 1 |
| Probable intracellular septation protein A | PP_4501 | P59364 | 1 |
| Probable ion-uptake ABC transporter | CPE0438 | Q8XNA0 | 1 |
| Probable isocitrate dehydrogenase [NADP] Icd2 (Oxalosuccinate decarboxylase) (IDH) (NADP+-specific ICDH) (IDP) | icd2 Rv0066c | O53611 | 1 |
| Probable lysyl endopeptidase | PGN_1416 | B2RKP0 | 1 |
| Probable M18 family aminopeptidase 2 (EC 3.4.11.-) | apeB B195_20205 | M5QQG3 | 1 |
| Probable M18 family aminopeptidase 2 (EC 3.4.11.-) | apeB pepC Rv0800 MTCY07H7A.09c | P9WHT1 | 1 |
| Probable major facilitator superfamily (MFS) transporter | PA4233 | Q9HWG1 | 1 |
| Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone]) | mqo A1S_0923 | A3M361 | 1 |
| Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone]) | mqo Cj0393c | P56954 | 1 |
| Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone]) | mqo NMB2096 | Q9JXD7 | 1 |
| Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone]) | mqo B195_12251 | M5QJL8 | 1 |
| Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone]) | mqo SSON_2268 | Q3YZZ7 | 1 |
| Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone]) | mqo SAOUHSC_02927 | Q2FV16 | 1 |
| Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone]) | mqo SAOUHSC_02647 | Q2FVQ5 | 1 |
| Probable malate:quinone oxidoreductase 2 (EC 1.1.5.4) (MQO 2) (Malate dehydrogenase [quinone] 2) | mqo2 MW2526 | Q8NUM4 | 1 |
| Probable manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) | ppaC SPy_0380 M5005_Spy0319 | P65757 | 1 |
| Probable medium-chain acyl-CoA ligase | PA3924 | Q9HX89 | 1 |
| Probable membrane transporter protein | CD630_32360 | Q17ZY0 | 1 |
| Probable membrane transporter protein | tauE KU39_2983 | A0A0K2L7L3 | 1 |
| Probable metallopeptidase | PA4498 | Q9HVS3 | 1 |
| Probable metalloprotease | PA5474 | Q9HT96 | 1 |
| Probable methylmalonate-semialdehyde dehydrogenase MmsA (Methylmalonic acid semialdehyde dehydrogenase) (MMSDH) | mmsA Rv0753c | O53816 | 1 |
| Probable MFS dicarboxylate transporter | PA5530 | Q9HT43 | 1 |
| Probable multidrug ABC transporter permease YbhR | ybhR b0792 JW5803 | P0AFP9 | 1 |
| Probable N-acetylmuramoyl-L-alanine amidase | YPO1683 | Q7CIX7 | 1 |
| Probable N-acetylneuraminic acid outer membrane channel protein NanC (NanR-regulated channel) (Porin NanC) | nanC yjhA b4311 JW5778 | P69856 | 1 |
| Probable N-succinyldiaminopimelate aminotransferase DapC (DAP-AT) (EC 2.6.1.17) | dapC Rv0858c | P9WPZ5 | 1 |
| Probable nadAB transcriptional regulator | nadR SSON_4540 | Q3YU04 | 1 |
| Probable Ni/Fe-hydrogenase 2 b-type cytochrome subunit | hybB b2995 JW5494 | P37180 | 1 |
| Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase) | nadD SP70585_1786 | C1C8Y3 | 1 |
| Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase) | nadD SPy_0308 M5005_Spy0263 | Q9A1F2 | 1 |
| Probable non-ribosomal peptide synthetase | PA3327 | Q9HYR8 | 1 |
| Probable nonribosomal peptide synthetase | PA4078 | Q9HWV0 | 1 |
| Probable outer membrane protein | opmQ PA2391 | Q9I189 | 1 |
| Probable outer membrane protein | PA4592 | Q9HVJ4 | 1 |
| Probable outer membrane protein | PA4837 | Q9HUX3 | 1 |
| Probable outer membrane protein | PA2525 | Q9I0V8 | 1 |
| Probable outer membrane protein | PA4589 | Q9HVJ6 | 1 |
| Probable outer membrane usher protein ElfC | elfC ycbS b0940 JW0923 | P75857 | 1 |
| Probable oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) | oadG VSAK1_07789 | A6D843 | 1 |
| Probable oxidoreductase | PA3256 | Q9HYY4 | 1 |
| Probable oxidoreductase | PA5309 | Q9HTP5 | 1 |
| Probable oxidoreductase | PA5181 | Q9HU08 | 1 |
| Probable oxidoreductase | PA2491 | Q9I0Z1 | 1 |
| Probable penicillin-binding protein DacB2 (D-alanyl-D-alanine carboxypeptidase) (DD-peptidase) (DD-carboxypeptidase) (PBP) (DD-transpeptidase) (Serine-type D-ala-D-ala carboxypeptidase) (D-amino acid... | dacB2 Rv2911 | I6Y204 | 1 |
| Probable peptidylarginine deiminase | PGN_0898 | B2RJ72 | 1 |
| Probable permease of ABC transporter | PA1808 | Q9I2T6 | 1 |
| Probable permease of ABC transporter | PA1809 | Q9I2T5 | 1 |
| Probable phenazine-specific methyltransferase | phzM PA4209 | Q9HWH2 | 1 |
| Probable phosphatidate cytidylyltransferase | PA2536 | Q9I0U8 | 1 |
| Probable phospholipid-binding lipoprotein MlaA | mlaA vacJ SF2424 S2559 | P43262 | 1 |
| Probable phosphoserine phosphatase | PA4960 | Q9HUK5 | 1 |
| Probable potassium transport system protein kup | kup PP_1200 | Q88NK7 | 1 |
| Probable propionyl-CoA carboxylase beta chain 5 (PCCase) (EC 6.4.1.3) (Propanoyl-CoA:carbon dioxide ligase) | accD5 pccB Rv3280 MTCY71.20 | P9WQH7 | 1 |
| Probable protein kinase UbiB (EC 2.7.-.-) | ubiB FTN_0459 | A0Q547 | 1 |
| Probable protein kinase UbiB (EC 2.7.-.-) | ubiB FTT_1298 | Q5NFD9 | 1 |
| Probable protein kinase UbiB (EC 2.7.-.-) (Ubiquinone biosynthesis protein UbiB) | ubiB PA5065 | Q9HUB8 | 1 |
| Probable protein kinase UbiB (EC 2.7.-.-) (Ubiquinone biosynthesis protein UbiB) | ubiB VSAK1_13180 | A6D2C5 | 1 |
| Probable proton/glutamate-aspartate symporter | gltP PA5479 | Q9HT91 | 1 |
| Probable pyruvate dehydrogenase E1 component, alpha subunit | PA3417 | Q9HYI8 | 1 |
| Probable quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase polypeptide I) | qoxB SAOUHSC_01001 | Q2FZK0 | 1 |
| Probable quinol oxidase subunit 2 (EC 1.10.3.-) (Quinol oxidase polypeptide II) | qoxA SAOUHSC_01002 | Q2FZJ9 | 1 |
| Probable quinone reductase Qor (NADPH:quinone reductase) (Zeta-crystallin homolog protein) | qor Rv1454c | O53146 | 1 |