| UPF0325 protein YaeH | yaeH BY96_04885 | A0A027U240 | 6 |
| Uridylate kinase (UK) (EC 2.7.4.22) (Uridine monophosphate kinase) (UMP kinase) (UMPK) | pyrH EcE24377A_0175 | A7ZHR1 | 6 |
| Vacuolating cytotoxin autotransporter [Cleaved into: Vacuolating cytotoxin; Vacuolating cytotoxin translocator] | vacA HP_0887 | P55981 | 6 |
| 1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE) | glgB Ecok1_34110 APECO1_3025 | A1AGW5 | 5 |
| 1,4-beta-N-acetylmuramidase (EC 3.2.1.17) | lytC spr1431 | Q8DP07 | 5 |
| 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) (Tartronate semialdehyde reductase) (TSAR) | garR APU18_16730 BE932_14530 SY51_18060 | A0A061YP03 | 5 |
| 2-hydroxyacid dehydrogenase (D-lactate dehydrogenase) (Fermentative D-lactate dehydrogenase) (Fermentative D-lactate dehydrogenase, NAD-dependent) (Lactate dehydrogenase) (EC 1.1.1.28) (NAD-dependent fermentative D-lactate dehydrogenase) | ldhA A5958_24820 AA102_23370 AC067_16095 AC789_1c15090 ACN002_1665 ACN77_11940 ACN81_14125 ACN87_19380 AKG99_21825 AM270_05105 AMK83_00390 AML07_18010 AML35_28190 APT94_18025 APU18_11185 APZ14_18455 ARC77_03125 AU473_17505 AUS26_06695 BE932_02645 BE949_03385 BE957_16755 BE963_21995 BHF46_12255 BIQ85_08290 BK251_04385 BK292_03800 BK373_11340 BK375_17465 BK400_18020 BMT53_03315 BMT61_07835 BMT91_24470 BMT94_19190 BN17_12011 BV389_13835 BWP17_15895 BXT93_25670 ECs2002 EL75_2366 EL79_2369 EL80_2377 ERS085366_01003 ERS085379_01714 ERS085383_03619 ERS085386_04098 ERS085404_03558 ERS085406_00659 ERS139235_02077 FORC28_3350 GJ12_09260 HMPREF3040_04157 JD73_26645 MJ49_24845 PU06_28605 RG28_15385 SM09_04153 SY51_08270 UC41_22425 UN86_23870 UN91_06400 WQ89_18615 WR15_00340 | C3TB72 | 5 |
| 2-methylisocitrate lyase (2-MIC) (MICL) (EC 4.1.3.30) ((2R,3S)-2-methylisocitrate lyase) | prpB BE932_25335 SY51_01830 WM48_02050 | A0A061YA81 | 5 |
| 2-oxoisovalerate dehydrogenase subunit beta (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) | bkdA2 PA2248 | Q9I1M1 | 5 |
| 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC (EC 3.1.3.45) (KDO 8-P phosphatase) | BX06_10085 | A0A028AJV6 | 5 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase 2 (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase 2) (KPHMT 2) | panB2 PA4729 | Q9HV70 | 5 |
| 30S Ribosomal protein S1 | rpsA spr0764 | Q8CWR9 | 5 |
| 30S ribosomal protein S11 | rpsK PA4240 | Q9HWF8 | 5 |
| 30S ribosomal protein S15 | rpsO EcE24377A_3649 | A7ZS62 | 5 |
| 30S ribosomal protein S19 | rpsS PA4259 | Q9HWD9 | 5 |
| 30S ribosomal protein S2 | rpsB spr2020 | Q8CWM8 | 5 |
| 30S ribosomal protein S3 | rpsC spr0195 | P0A4C4 | 5 |
| 5'-deoxynucleotidase YfbR (EC 3.1.3.89) (5'-deoxyribonucleotidase) (Nucleoside 5'-monophosphate phosphohydrolase) | yfbR UMNK88_2841 | A0A0E0U0U4 | 5 |
| 50S ribosomal protein L1 | rplA NGO1854 | Q5F5R2 | 5 |
| 50S ribosomal protein L10 | rplJ EcE24377A_4525 | A7ZUJ8 | 5 |
| 50S ribosomal protein L18 | rplR CKO_04717 | A8AQJ9 | 5 |
| 50S ribosomal protein L19 | rplS spr1171 | Q8CWQ9 | 5 |
| 50S ribosomal protein L23 | rplW PA4261 | Q9HWD7 | 5 |
| 50S ribosomal protein L24 | rplX ESA_00016 | A7MPH5 | 5 |
| 50S ribosomal protein L27 | rpmA EcE24377A_3670 | A7ZS81 | 5 |
| 50S ribosomal protein L28 | rpmB PA5316 | Q9HTN8 | 5 |
| 50S ribosomal protein L6 | rplF EcE24377A_3788 | A7ZSJ4 | 5 |
| 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | BE932_07605 BET08_08655 SY51_11785 | A0A061K5W1 | 5 |
| ABC transporter ATP-binding protein (ABC-F family ATPase) (Putative ABC transporter ATP-binding protein) (Putative ABC transporter ATP-binding protein YheS) | ybiT yheS_1 A4T40_07810 APT94_22290 BE949_12915 BE963_18355 BHS81_04995 BIQ85_05035 BK251_07830 BK292_21295 BK334_19930 BK383_19155 BMT97_07920 BXT93_09385 ECONIH1_04685 ERS085406_04002 MS6198_08960 | A0A023L1Y1 | 5 |
| ABC transporter substrate-binding protein | ECONIH1_22565 | A0A0A1AJL2 | 5 |
| ABC transporter substrate-binding protein | BE932_26475 SY51_02925 | A0A066T686 | 5 |
| ABC transporter substrate-binding protein | APU18_19820 BE932_20070 SY51_23515 | A0A061YGV8 | 5 |
| Acetyl-coenzyme A synthetase 1 (AcCoA synthetase 1) (Acs 1) (EC 6.2.1.1) (Acetate--CoA ligase 1) (Acyl-activating enzyme 1) | acsA1 PA0887 | Q9I558 | 5 |
| Aconitate hydratase A (ACN) (Aconitase) (EC 4.2.1.3) ((2R,3S)-2-methylisocitrate dehydratase) ((2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate dehydratase) (Iron-responsive protein-like) (IRP-like) (Probable 2-methyl-cis-aconitate hydratase) (EC 4.2.1.99) (RNA-binding protein) | acnA PA1562 | Q9I3F5 | 5 |
| Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase) | purA spr0021 | P65888 | 5 |
| Alcohol dehydrogenase | adhA PA5427 | Q9HTD9 | 5 |
| Aldehyde dehydrogenase | BE932_02700 SY51_08325 | A0A066SZX6 | 5 |
| Aldehyde oxidase | BE932_25125 SY51_01660 | A0A066T149 | 5 |
| Aldehyde-alcohol dehydrogenase | adhE spr1837 | Q8DNA5 | 5 |
| Aldehyde-alcohol dehydrogenase | adhE CE10_1418 | A0A0E0V3X7 | 5 |
| Alkaline phosphatase (EC 3.1.3.1) | phoA ECRM12581_2290 | A0A023YSZ5 | 5 |
| ALS ss C and LacI and Peripla BP 3 domain contain ing protein | TTRE_0000894001 | A0A077ZJI9 | 5 |
| Amidophosphoribosyltransferase (ATase) (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (GPATase) | purF PA3108 | Q51342 | 5 |
| Amino acid transporter (Glutamate/aspartate ABC transporter substrate-binding protein) | BE932_26875 SY51_03305 | A0A061KSF0 | 5 |
| Aminopeptidase N | pepN CE10_0960 | A0A0E0V2K3 | 5 |
| Arginine transporter ATP-binding subunit (Glutamate/aspartate transport ATP-binding protein GltL) | artP BE932_26860 SY51_03290 | A0A066T694 | 5 |
| Arginine/ornithine binding protein AotJ | aotJ PA0888 | G3XD47 | 5 |
| Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase) | argH PA5263 | P50987 | 5 |
| Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase) | argH BE932_19225 SY51_22760 | A0A061KXW5 | 5 |
| Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS) | asnS BE932_28905 SY51_05280 | A0A066SSJ3 | 5 |
| Aspartate aminotransferase (AspAT) (EC 2.6.1.1) (Transaminase A) | aspC PA3139 | P72173 | 5 |
| Aspartate ammonia-lyase (Aspartase) (EC 4.3.1.1) | aspA PA5429 | Q9HTD7 | 5 |
| Aspartokinase (EC 2.7.2.4) | lysC A5958_08635 AA102_12470 ACN77_13115 ACN81_05635 ACU90_04680 AM270_18540 AMK83_25475 BE957_27515 BK251_06625 BK292_00910 BMT53_13435 BMT61_09215 ERS085374_01601 ERS085379_04006 ERS139235_02640 GJ12_24700 HW42_01680 PU06_05905 UN86_02920 | A0A066RJM7 | 5 |
| Aspartokinase (EC 2.7.2.4) (Aspartate kinase) | lysC PA0904 | O69077 | 5 |
| ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha) | atpA NGO2148 | Q5F4Z2 | 5 |
| ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b) | atpF NGO2146 | Q5F4Z4 | 5 |
| ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta) | atpD NGO2150 | Q5F4Z0 | 5 |
| ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta) | atpH Ec53638_2106 | A0A0E1T1N5 | 5 |
| ATP-dependent Clp protease ATP-binding subunit ClpX | clpX spr1427 | P63792 | 5 |
| ATP-dependent Clp protease ATP-binding subunit ClpX | clpX PA1802 | Q9I2U0 | 5 |
| ATP-dependent zinc metalloprotease FtsH (EC 3.4.24.-) | ftsH PA4751 | Q9HV48 | 5 |
| Beta-barrel assembly-enhancing protease (EC 3.4.-.-) | yggG_1 bepA AC067_02815 APT94_12520 BE932_09990 BE949_09980 BE963_28215 BIQ85_14040 BK375_00680 BMT94_06155 BMT97_17080 ERS085366_00328 SM09_02653 SY51_14320 UC41_17200 | A0A023KM27 | 5 |
| Beta-lactamase (EC 3.5.2.6) | ampC bla(ampc-EC6) BE932_21230 SY51_23940 | Q5MAJ8 | 5 |
| Branched chain amino acid ABC transporter substrate-binding protein (Leucine ABC transporter substrate-binding protein) | BE932_16240 SY51_19735 | A0A061KAJ2 | 5 |
| Capsid protein | BX23_14150 | A0A028E3K7 | 5 |
| Carboxy-terminal peptidase | prc NMB1332 | Q9JZ21 | 5 |
| Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase) | katG Ecok1_39170 APECO1_2524 | A1AIC1 | 5 |
| Cell division protein FtsA | ftsA SF0091 S0093 | P0ABH3 | 5 |
| Cell division protein FtsH (HflK protein) (Protease modulator HflK) | hflK A5958_07485 AMK83_03575 BE957_26555 ERS085379_04133 ERS085386_00992 ERS139235_04250 UN86_20825 | A0A066R9J0 | 5 |
| Cell division protein FtsZ | ftsZ PA4407 | P47204 | 5 |
| Cell division protein ZipA | zipA PA1528 | Q9I3I5 | 5 |
| Chitin-binding protein CbpD (Protease LasD) | cbpD lasD PA0852 | Q9I589 | 5 |
| CTP synthase (EC 6.3.4.2) (Cytidine 5'-triphosphate synthase) (Cytidine triphosphate synthetase) (CTP synthetase) (CTPS) (UTP--ammonia ligase) | pyrG PA3637 | Q9HXZ4 | 5 |
| Cystathionine gamma-synthase (EC 2.5.1.48) | BE932_19110 SY51_22645 | A0A061L1M8 | 5 |
| Cytochrome b562 | UN86_21160 WR15_06660 | A0A0A6VHK7 | 5 |
| Cytochrome c oxidase, cbb3-type, CcoO subunit | ccoO2 PA1556 | Q9I3G1 | 5 |
| Cytochrome c5 | cycB PA5300 | Q9HTQ4 | 5 |
| Cytochrome c551 peroxidase | HP_1461 | O25997 | 5 |
| Cytochrome c551 peroxidase (CCP) (Cytochrome c peroxidase) (EC 1.11.1.5) | ccpA PA4587 | P14532 | 5 |
| D-methionine-binding lipoprotein MetQ | metQ yaeC b0197 JW0193 | P28635 | 5 |
| D-serine dehydratase (EC 4.3.1.18) (D-serine deaminase) (DSD) | dsdA BE932_09425 SY51_13775 | A0A061L375 | 5 |
| Deleted. | 0 | A0A0D8W5Y7 | 5 |
| Deleted. | 0 | A0A025GFI7 | 5 |
| Deleted. | 0 | A0A061KQ64 | 5 |
| Deleted. | 0 | A0A026H097 | 5 |
| Deleted. | 0 | A0A025FQJ4 | 5 |
| Deleted. | 0 | A0A066SQU9 | 5 |
| Deleted. | 0 | A0A0F6GV12 | 5 |
| Deleted. | 0 | A0A0A8KET4 | 5 |
| Deleted. | 0 | A0A0D6I5C5 | 5 |
| Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase) | folP BE932_14800 SY51_18320 | A0A061KD91 | 5 |
| DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)]) | ligA A4T40_17325 BK334_04040 ECONIH1_13890 MS6198_27350 | A0A023L520 | 5 |
| DNA polymerase III subunit beta (EC 2.7.7.7) | dnaN Z5192 ECs4636 | P0A990 | 5 |
| DNA-binding transcriptional repressor | uidR ECED1_1817 | B7MV94 | 5 |
| DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta) | rpoB spr1777 | Q8DNF0 | 5 |
| DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta') | rpoC spr1776 | Q8DNF1 | 5 |
| DUF2190 domain-containing protein (Membrane protein) | A4T50_20360 APT94_24685 BE932_28620 BK334_20280 BMT94_17150 SM09_00047 SY51_04995 | A0A061YK47 | 5 |
| Elongation factor Tu (EF-Tu) | tuf tufA spr1343 | P64031 | 5 |
| Elongation factor Tu 1 (EF-Tu 1) (Bacteriophage Q beta RNA-directed RNA polymerase subunit III) (P-43) | tufA b3339 JW3301 | P0CE47 | 5 |
| Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase) | eno PA3635 | Q9HXZ5 | 5 |