| 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) | sucA B195_20300 | M5QEL7 | 1 |
| 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) | odhA SAOUHSC_01418 | Q2FYM1 | 1 |
| 2-oxoglutarate dehydrogenase, E1 component (EC 1.2.4.2) | sucA MXAN_6035 | Q1CZK3 | 1 |
| 2-oxoisovalerate dehydrogenase E1 component subunit alpha | B195_09132 | M5R0U4 | 1 |
| 2-oxoisovalerate dehydrogenase subunit beta | B195_09127 | M5QJ83 | 1 |
| 2-oxoisovalerate dehydrogenase subunit beta (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) | bfmBAB bfmB1b BSU24040 | P37941 | 1 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (SEPHCHC synthase) (EC 2.2.1.9) (Menaquinone biosynthesis protein MenD) | menD Rv0555 | P9WK11 | 1 |
| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB (EC 2.1.1.185) (23S rRNA (guanosine2251 2'-O)-methyltransferase) (23S rRNA Gm2251 2'-O-methyltransferase) | rlmB VSAK1_09923 | A6D8C5 | 1 |
| 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase) | rlmD VSAK1_07994 | A6D8G9 | 1 |
| 23S rRNA methyltransferase J (Fragment) | rrmJ VSAK1_11033 | A6D8P7 | 1 |
| 27 kDa outer membrane protein (HopV protein) | hopV omP27 | Q9X749 | 1 |
| 28 kDa outer membrane protein Omp28 | PGN_0122 | B2RGZ6 | 1 |
| 29 kDa antigen CFP29 | cfp29 Rv0798c | I6WZG6 | 1 |
| 3'-5' exoribonuclease YhaM (EC 3.1.-.-) | yhaM lmo2220 | Q8Y556 | 1 |
| 3'-5' ssDNA/RNA exonuclease TatD (EC 3.1.11.-) (EC 3.1.13.-) (DNase TatD) | tatD SSON_4014 | Q3YVC6 | 1 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (EC 4.1.99.12) | ribB YPO0658 y3520 YP_2973 | Q8ZI56 | 1 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (EC 4.1.99.12) | ribB PA4054 | Q9HWX4 | 1 |
| 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type I DHQase) (Type I dehydroquinase) (DHQ1) | aroD SPy_0809 M5005_Spy0624 | P63590 | 1 |
| 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) | aroQ Fphi_0275 | B0TZ52 | 1 |
| 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) | aroQ B195_03553 | M5QPJ4 | 1 |
| 3-dehydroquinate synthase (EC 4.2.3.4) | aroB PA5038 | P34002 | 1 |
| 3-dehydroquinate synthase (EC 4.2.3.4) | aroB SPy_1577 M5005_Spy1298 | Q99YR3 | 1 |
| 3-dehydroquinate synthase (EC 4.2.3.4) | aroB CD630_18330 | Q187E4 | 1 |
| 3-dehydroshikimate dehydratase (EC 4.2.1.118) | quiC J560_2453 | A0A062EWV4 | 1 |
| 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC (EC 3.1.3.45) (KDO 8-P phosphatase) | yrbI FTN_0905 | A0Q6C8 | 1 |
| 3-deoxy-D-manno-octulosonic-acid transferase | VSAK1_09673 | A6D0H5 | 1 |
| 3-Deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) | kdtA FTT_1561 | Q5NEQ8 | 1 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (CKS) (CMP-KDO synthase) | kdsB FTN_0683 | A0Q5R0 | 1 |
| 3-hydroxy-3-methylglutaryl coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.88) | B195_17884 | M5QVY0 | 1 |
| 3-hydroxy-3-methylglutaryl coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.88) | mvaS.1 SPy_0880 | Q9A094 | 1 |
| 3-hydroxy-3-methylglutaryl coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.88) | SAOUHSC_02859 | Q2FV77 | 1 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase (EC 2.3.1.245) | lsrF YPO0408 y3773 YP_3773 | Q7CG47 | 1 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase (EC 2.3.1.245) | lsrF SCH_3967 | Q57HD9 | 1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase) | fabZ Fphi_1199 | B0TXG6 | 1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase) | fabZ FTN_1479 | A0Q7Y1 | 1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase) | fabZ CPF_1329 | Q0TRG5 | 1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase) | fabZ STM0227 | P0A1H9 | 1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase) | fabZ YPO1055 y3124 YP_2795 | Q8ZH57 | 1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase) | fabZ SSON_0192 | Q3Z5H8 | 1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase) | fabZ SPy_1746 M5005_Spy1487 | P64110 | 1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase) | fabZ OOM_0745 | I2AYI7 | 1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase) | fabZ SAOUHSC_02336 | Q2FWF5 | 1 |
| 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) | crt CJD_2911 | B1V3D1 | 1 |
| 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) | hbd CD630_10580 | Q18AQ7 | 1 |
| 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) | fadB2 Rv0468 | P9WNP7 | 1 |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59) (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA) (Beta-hydroxydecanoyl thioester dehydrase) (Trans-2-decenoyl-[acyl-carrier-protein] isomerase) (EC 5.3.3.14) | fabA B195_07982 | M5QJ80 | 1 |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59) (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA) (Beta-hydroxydecanoyl thioester dehydrase) (Trans-2-decenoyl-[acyl-carrier-protein] isomerase) (EC 5.3.3.14) | fabA PP_4174 | Q88FC4 | 1 |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59) (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA) (Beta-hydroxydecanoyl thioester dehydrase) (Trans-2-decenoyl-[acyl-carrier-protein] isomerase) (EC 5.3.3.14) | fabA YPO1430 y2740 YP_0875 | Q8ZG80 | 1 |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59) (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA) (Beta-hydroxydecanoyl thioester dehydrase) (Trans-2-decenoyl-[acyl-carrier-protein] isomerase) (EC 5.3.3.14) | fabA SFV_0962 | Q0T681 | 1 |
| 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) | FTT_1666c | Q5NEG9 | 1 |
| 3-hydroxyisobutyrate dehydrogenase (HIBADH) (EC 1.1.1.31) | B195_03887 | M5R2Q9 | 1 |
| 3-hydroxyisobutyrate dehydrogenase (HIBADH) (EC 1.1.1.31) | mmsB PA3569 | P28811 | 1 |
| 3-isopropylmalate dehydratase large subunit (EC 4.2.1.-) (EC 4.2.1.33) | leuC FTN_0061 | A0Q407 | 1 |
| 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase) | leuC PA3121 | Q9HZA3 | 1 |
| 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | leuB FTN_0059 | A0Q405 | 1 |
| 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH) | leuB NMB1031 | Q9JZI9 | 1 |
| 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH) | leuB Rv2995c MTV012.09 | P9WKK9 | 1 |
| 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH) | leuB PA3118 | Q51375 | 1 |
| 3-ketoacyl-(Acyl-carrier-protein) reductase (EC 1.1.1.100) | fabG B195_09896 | M5QGK9 | 1 |
| 3-ketoacyl-(Acyl-carrier-protein) reductase (EC 1.1.1.100) | fabG VSAK1_06765 | A6D1W1 | 1 |
| 3-ketoacyl-acyl carrier protein reductase | SC1083_1609 | G4A9U0 | 1 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) (KPHMT) | panB FTN_1352 | A0Q7L2 | 1 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) (KPHMT) | panB B195_04462 | M5R333 | 1 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) (KPHMT) | panB SSON_0142 | Q3Z5M6 | 1 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) (KPHMT) | panB KW89_815 | A0A0K2DVB1 | 1 |
| 3-oxoacyl-(Acyl carrier protein) synthase (EC 2.3.1.41) | VSAK1_06770 | A6D1W2 | 1 |
| 3-oxoacyl-(Acyl carrier protein) synthase I (EC 2.3.1.41) | B195_07977 | M5R080 | 1 |
| 3-oxoacyl-(Acyl-carrier-protein) reductase (EC 1.1.1.100) | fabG HPSD74_1210 | U4SHD6 | 1 |
| 3-oxoacyl-(Acyl-carrier-protein) reductase (EC 1.1.1.100) | fabG FTT_1375 | Q5NF68 | 1 |
| 3-oxoacyl-(Acyl-carrier-protein) reductase, putative (EC 1.1.1.100) | SAOUHSC_01199 | Q2FZ53 | 1 |
| 3-oxoacyl-[acyl-carrier protein] reductase (3-ketoacyl-acyl carrier protein reductase) (EC 1.1.1.100) | fabG CD630_11820 | Q18B45 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41) (3-oxoacyl-[acyl-carrier-protein] synthase I) (Beta-ketoacyl-ACP synthase I) (KAS I) | fabB fabC b2323 JW2320 | P0A953 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase 1) (KAS 1) | kasA Rv2245 MTCY427.26 | P9WQD9 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.179) | Fphi_1347 | B0TY11 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.179) | fabF-1 NMB0219 | Q9K1D8 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.179) | fabF1 PA2965 | G3XDA2 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.179) | fabF SPy_1748 | Q99YD7 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.179) | SAOUHSC_00921 | Q2FZR9 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.179) | fabF FTT_1377 | Q5NF66 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.179) (3-oxoacyl-[acyl-carrier-protein] synthase II) (Beta-ketoacyl-ACP synthase II) (KAS II) | fabF fabJ b1095 JW1081 | P0AAI5 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase 2) (KAS 2) | kasB Rv2246 MTCY427.27 | P9WQD7 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) | fabH FTN_1337 | A0Q7J7 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) | fabH YPO1597 y1756 YP_2257 | Q8ZFT7 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) | fabH SPy_1754 M5005_Spy1494 | Q99YD2 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) | fabH FTT_1373 | Q5NF70 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) | fabH LMRG_01630 | C0LNR0 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase I | fabB SCH_2380 | Q57LX6 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase I (Beta-ketoacyl-[acyl-carrier-protein] synthase I) | fabB S2534 SF2399 AJR25_001120 AJR27_002885 | Q83QQ9 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase I (EC 2.3.1.41) | fabB YPO2757 | Q7CJB1 | 1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase I (EC 4.1.2.13) | fbaB STM2141 | Q7CQ97 | 1 |
| 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) | aroA SPy_1352 M5005_Spy1101 | Q99Z83 | 1 |
| 30S ribosomal protein S1 | rpsA jhp_0982 | Q9ZKF6 | 1 |
| 30S ribosomal protein S1 | Fphi_0665 | B0TVX7 | 1 |
| 30S ribosomal protein S1 | rpsA KPN_00938 | A6T703 | 1 |
| 30S ribosomal protein S1 | rpsA ABSDF1738 | B0VN01 | 1 |
| 30S ribosomal protein S1 | rpsA B195_20705 | M5QTF8 | 1 |
| 30S ribosomal protein S1 | rpsA YPO1392 | Q7CHJ6 | 1 |
| 30S ribosomal protein S1 | rpsA SF0907 S0971 | P0AG70 | 1 |
| 30S ribosomal protein S1 | rpsA Rv1630 MTCY01B2.22 | P9WH43 | 1 |
| 30S ribosomal protein S1 | SC1083_0646 | G4A755 | 1 |