| Conjugal transfer protein TraE | traE KU39_1p31 | A0A0K2L8E5 | 1 |
| Conjugal transfer protein TraI | traI KW89_3p33 | A0A0K2E241 | 1 |
| Conserved domain protein | MXAN_4798 | Q1D314 | 1 |
| Conserved domain protein | MXAN_6895 | Q1CX64 | 1 |
| Conserved domain protein | MXAN_6548 | Q1CY53 | 1 |
| Conserved domain protein | MXAN_3138 | Q1D7N2 | 1 |
| Conserved domain protein | MXAN_2761 | Q1D8P5 | 1 |
| Conserved domain protein | MXAN_2031 | Q1DAR3 | 1 |
| Conserved domain protein | MXAN_0751 | Q1DEA6 | 1 |
| Conserved domain protein | MXAN_4915 | Q1D2Q2 | 1 |
| Conserved domain protein | AC3_3188 | B1BSG7 | 1 |
| Conserved domain protein | FSU_1953 | C9RR85 | 1 |
| Conserved domain protein | FSU_2556 | D9S5I7 | 1 |
| Conserved domain protein | FSU_0283 | C9RPR6 | 1 |
| Conserved domain protein | FSU_1022 | C9RM45 | 1 |
| Conserved domain protein | FSU_1781 | D9SB40 | 1 |
| Conserved domain protein | FSU_1179 | D9S9M7 | 1 |
| Conserved domain protein | FSU_1462 | C9RPF6 | 1 |
| Conserved domain protein | FSU_0872 | C9RLC0 | 1 |
| Conserved domain protein | FSU_3146 | D9S8D7 | 1 |
| Conserved domain protein | FSU_1954 | C9RR86 | 1 |
| Conserved domain protein | FSU_0402 | D9S5Z5 | 1 |
| Conserved domain protein | FSU_3272 | C9RN35 | 1 |
| Conserved domain protein | FSU_2853 | D9S6X5 | 1 |
| Conserved domain protein | FSU_0981 | C9RM07 | 1 |
| Conserved domain protein | FSU_1795 | D9SB51 | 1 |
| Conserved domain protein | FSU_3147 | D9S8D8 | 1 |
| Conserved domain protein | FSU_0784 | D9S819 | 1 |
| Conserved domain protein | FSU_2376 | D9S4Q2 | 1 |
| Conserved domain protein | FSU_0984 | D9S8X9 | 1 |
| Conserved domain protein | FSU_1508 | C9RPY2 | 1 |
| Conserved domain protein | FSU_1266 | C9RNI7 | 1 |
| Conserved domain protein | FSU_1339 | C9RNQ3 | 1 |
| Conserved domain protein | FSU_2368 | C9RII7 | 1 |
| Conserved domain protein | FSU_0838 | C9RL89 | 1 |
| Conserved domain protein | FSU_2015 | D9SBN8 | 1 |
| Conserved domain protein | FSU_3188 | C9RMH1 | 1 |
| Conserved domain protein | FSU_1794 | C9RQT9 | 1 |
| Conserved domain protein | FSU_0794 | D9S828 | 1 |
| Conserved domain protein | FSU_0911 | D9S8R7 | 1 |
| Conserved domain protein | FSU_1842 | C9RQY8 | 1 |
| Conserved hypothetcial protein | FTT_1611 | Q5NEL6 | 1 |
| Conserved hypothetical exported protein | Smlt4555 | B2FN99 | 1 |
| Conserved hypothetical exported protein | Smlt4628 | B2FNH0 | 1 |
| Conserved hypothetical exported protein | Smlt3265 | B2FMA9 | 1 |
| Conserved hypothetical exported protein | Smlt2345 | B2FQY5 | 1 |
| Conserved hypothetical exported protein | Smlt3680 | B2FR42 | 1 |
| Conserved hypothetical exported protein | Smlt3686 | B2FR48 | 1 |
| Conserved hypothetical exported protein | Smlt1121 | B2FRX3 | 1 |
| Conserved hypothetical exported protein | Smlt1122 | B2FRX4 | 1 |
| Conserved hypothetical exported protein | Smlt1140 | B2FRZ2 | 1 |
| Conserved hypothetical exported protein | Smlt4677 | B2FP89 | 1 |
| Conserved hypothetical integral membrane protein | HP_0362 | O25128 | 1 |
| Conserved hypothetical lipoprotein | FTT_0507 | Q5NHF0 | 1 |
| Conserved hypothetical lipoprotein | lpnA FTT_0901 | Q5NGE4 | 1 |
| Conserved hypothetical lipoprotein | lpnB FTT_0904 | Q5NGE1 | 1 |
| Conserved hypothetical lipoprotein | FTT_1040 | Q5NG19 | 1 |
| Conserved hypothetical lipoprotein | FTT_1103 | Q5NFW3 | 1 |
| Conserved hypothetical membrane protein | Fphi_0873 | B0TWI8 | 1 |
| Conserved hypothetical membrane protein | FTN_1038 | A0Q6R0 | 1 |
| Conserved hypothetical membrane protein | FTT_0017 | Q5NIP9 | 1 |
| Conserved hypothetical membrane protein | FTT_0166c | Q5NIB0 | 1 |
| Conserved hypothetical membrane protein | FTT_0295 | Q5NHZ8 | 1 |
| Conserved hypothetical membrane protein | FTT_0443 | Q5NHL0 | 1 |
| Conserved hypothetical membrane protein | FTT_0555 | Q5NHB1 | 1 |
| Conserved hypothetical membrane protein | FTT_0676 | Q5NH00 | 1 |
| Conserved hypothetical membrane protein | FTT_0807 | Q5NGM8 | 1 |
| Conserved hypothetical membrane protein | FTT_1251c | Q5NFI3 | 1 |
| Conserved hypothetical membrane protein | FTT_1342 | Q5NF98 | 1 |
| Conserved hypothetical outer membrane protein | VSAK1_05870 | A6CZG4 | 1 |
| Conserved hypothetical receptor | VS_1633 | B7VP69 | 1 |
| Conserved hypothetical repetitive protein | Smlt3358 | B2FN59 | 1 |
| Conserved hypothetical TPR repeat protein | PP_0725 | Q88PX3 | 1 |
| Conserved membrane protein | FTT_0181c | Q5NIA0 | 1 |
| Conserved protein | VS_II0747 | B7VRZ8 | 1 |
| Conserved protein | Rv3722c | O69689 | 1 |
| Conserved protein | Rv0831c | O53842 | 1 |
| Conserved protein | Rv0925c | I6Y946 | 1 |
| Conserved protein | Rv3099c | O05777 | 1 |
| Conserved protein | Rv3678c | I6YGW9 | 1 |
| Conserved protein | Rv1531 | O53905 | 1 |
| Conserved protein | Rv3169 | O53319 | 1 |
| Conserved protein TB18.5 | TB18.5 Rv0164 | L7N657 | 1 |
| Conserved protein TB9.4 | TB9.4 Rv3208A | Q6MWZ8 | 1 |
| Conserved virulence factor B | cvfB SAOUHSC_01391 | Q2FYP3 | 1 |
| Copper resistance protein A | pcoA PA2065 | Q9I250 | 1 |
| Copper resistance protein B | pcoB PA2064 | Q9I251 | 1 |
| Copper resistance protein B | NSU_3011 | G6EF90 | 1 |
| Copper resistance protein B | NSU_2561 | G6EDZ0 | 1 |
| Copper-binding protein | NSU_2562 | G6EDZ1 | 1 |
| Copper-exporting P-type ATPase (EC 3.6.3.54) (Copper-exporting P-type ATPase A) (Cu(+)-exporting ATPase) (Cu(I)-translocating P-type ATPase) | copA SAOUHSC_02873 | Q2FV64 | 1 |
| Copper-translocating P-type ATPase (EC 3.6.3.4) | CJD_0664 | B1V258 | 1 |
| Coproporphyrinogen III oxidase (EC 1.3.3.3) | hemN spr1266 | Q8DPA6 | 1 |
| Coproporphyrinogen oxidase (EC 1.3.3.3) | hemF MXAN_6762 | Q1CXJ4 | 1 |
| Coproporphyrinogen-III oxidase (EC 1.3.98.3) | B195_20925 | M5QC39 | 1 |
| Coproporphyrinogen-III oxidase (EC 1.3.98.3) | VSAK1_12492 | A6D7M1 | 1 |
| Cpn60 (Fragment) | cpn60 | Q8KPD7 | 1 |
| Cps7G | SP70585_1891 | C1C9A4 | 1 |
| CreA protein | VSAK1_15332 | A6D652 | 1 |
| CRISPR-associated endonuclease Cas9/Csn1 (EC 3.1.-.-) (SpCas9) (SpyCas9) | cas9 csn1 SPy_1046 | Q99ZW2 | 1 |