| Actin, cytoplasmic 1 (Beta-actin) [Cleaved into: Actin, cytoplasmic 1, N-terminally processed] | Actb | P60710 | 28 |
| G1/S-specific cyclin-D2 | Ccnd2 Cyl-2 | P30280 | 24 |
| Polyubiquitin-C [Cleaved into: Ubiquitin; Ubiquitin-related 1; Ubiquitin-related 2] | Ubc | P0CG50 | 21 |
| 40S ribosomal protein S10 | Rps10 | P63325 | 20 |
| Apoptosis regulator Bcl-2 | Bcl2 Bcl-2 | P10417 | 20 |
| Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (CRK1) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) | Mapk14 Crk1 Csbp1 Csbp2 | P47811 | 20 |
| Mortality factor 4-like protein 1 (MORF-related gene 15 protein) (Testis-expressed gene 189 protein) (Transcription factor-like protein MRG15) | Morf4l1 Mrg15 Tex189 | P60762 | 20 |
| Phosphoglycerate kinase 1 (EC 2.7.2.3) | Pgk1 Pgk-1 | P09411 | 20 |
| 60S ribosomal protein L23 | Rpl23 | P62830 | 19 |
| Anaphase-promoting complex subunit 5 (APC5) (Cyclosome subunit 5) | Anapc5 MNCb-2778 | Q8BTZ4 | 19 |
| E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2) | Mdm2 | P23804 | 19 |
| Epidermal growth factor receptor (EC 2.7.10.1) | Egfr | Q01279 | 19 |
| 60S ribosomal protein L36a (60S ribosomal protein L44) | Rpl36a Rpl44 | P83882 | 18 |
| Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Aldolase 1) (Muscle-type aldolase) | Aldoa Aldo1 | P05064 | 18 |
| Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Autocrine motility factor) (AMF) (Neuroleukin) (NLK) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) | Gpi Gpi1 | P06745 | 18 |
| RING finger protein 11 (NEDD4 WW domain-binding protein 2) (Sid 1669) | Rnf11 N4wbp2 Sid1669 | Q9QYK7 | 18 |
| Transcription elongation factor B polypeptide 2 (Elongin 18 kDa subunit) (Elongin-B) (EloB) (RNA polymerase II transcription factor SIII subunit B) (SIII p18) | Tceb2 | P62869 | 18 |
| 40S ribosomal protein S24 | Rps24 | P62849 | 17 |
| Calmodulin (CaM) | Calm1 Calm Cam Cam1; Calm2 Cam2 Camb; Calm3 Cam3 Camc | P62204 | 17 |
| Cyclin-dependent kinase inhibitor 1 (CDK-interacting protein 1) (Melanoma differentiation-associated protein) (p21) | Cdkn1a Cip1 Waf1 | P39689 | 17 |
| Peroxiredoxin-2 (EC 1.11.1.15) (Thiol-specific antioxidant protein) (TSA) (Thioredoxin peroxidase 1) (Thioredoxin-dependent peroxide reductase 1) | Prdx2 Tdpx1 Tpx | Q61171 | 17 |
| 60S ribosomal protein L41 | Rpl41 | P62947 | 16 |
| D-3-phosphoglycerate dehydrogenase (3-PGDH) (EC 1.1.1.95) (A10) | Phgdh | Q61753 | 16 |
| Protein CDV3 (Carnitine deficiency-associated protein 3) (Tyrosine-phosphorylated protein 36) (TPP36) | Cdv3 | Q4VAA2 | 16 |
| Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (SERCA2) (SR Ca(2+)-ATPase 2) (EC 3.6.3.8) (Calcium pump 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase) | Atp2a2 | O55143 | 16 |
| Signal transducer and activator of transcription | Stat1 mCG_123683 | Q8C3V4 | 16 |
| Tumor necrosis factor receptor superfamily member 6 (Apo-1 antigen) (Apoptosis-mediating surface antigen FAS) (FASLG receptor) (CD antigen CD95) | Fas Apt1 Tnfrsf6 | P25446 | 16 |
| Actin, aortic smooth muscle (Alpha-actin-2) | Acta2 Actsa Actvs | P62737 | 15 |
| H-2 class I histocompatibility antigen, K-B alpha chain (H-2K(B)) | H2-K1 H2-K | P01901 | 15 |
| Major prion protein (PrP) (PrP27-30) (PrP33-35C) (CD antigen CD230) | Prnp Prn-p Prp | P04925 | 15 |
| Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I) | Mt1 | P02802 | 15 |
| Ornithine decarboxylase (ODC) (EC 4.1.1.17) | Odc1 Odc | P00860 | 15 |
| Protein unc-119 homolog B | Unc119b | Q8C4B4 | 15 |
| S-adenosylmethionine synthase isoform type-2 (AdoMet synthase 2) (EC 2.5.1.6) (Methionine adenosyltransferase 2) (MAT 2) | Mat2a | Q3THS6 | 15 |
| Sideroflexin-1 | Sfxn1 F | Q99JR1 | 15 |
| 40S ribosomal protein S9 | Rps9 | Q6ZWN5 | 14 |
| 60S ribosomal protein L27 | Rpl27 | P61358 | 14 |
| Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 (EC 1.14.11.-) (Alkylated DNA repair protein alkB homolog 4) | Alkbh4 | Q9D8F1 | 14 |
| Cyclic AMP-dependent transcription factor ATF-2 (cAMP-dependent transcription factor ATF-2) (EC 2.3.1.48) (Activating transcription factor 2) (MXBP protein) (cAMP response element-binding protein CRE-BP1) | Atf2 | P16951 | 14 |
| Cytochrome c, somatic | Cycs | P62897 | 14 |
| DNA-directed RNA polymerases I and III subunit RPAC2 (RNA polymerases I and III subunit AC2) (AC19) (DNA-directed RNA polymerase I subunit D) (RNA polymerase I 16 kDa subunit) (RPA16) | Polr1d Rpo1-3 | P97304 | 14 |
| Engulfment and cell motility protein 1 (Protein ced-12 homolog) | Elmo1 | Q8BPU7 | 14 |
| Ferritin heavy chain (Ferritin H subunit) (EC 1.16.3.1) [Cleaved into: Ferritin heavy chain, N-terminally processed] | Fth1 Fth | P09528 | 14 |
| Glutaredoxin-3 (PKC-interacting cousin of thioredoxin) (PICOT) (PKC-theta-interacting protein) (PKCq-interacting protein) (Thioredoxin-like protein 2) | Glrx3 Picot Txnl2 | Q9CQM9 | 14 |
| Heterogeneous nuclear ribonucleoprotein K (hnRNP K) | Hnrnpk Hnrpk | P61979 | 14 |
| Histone H3.3 | H3f3a H3.3a; H3f3b H3.3b | P84244 | 14 |
| Lipoma HMGIC fusion partner | Lhfp | Q8BM86 | 14 |
| Low-density lipoprotein receptor (LDL receptor) | Ldlr | P35951 | 14 |
| Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1] | Csf1 Csfm | P07141 | 14 |
| Mitogen-activated protein kinase 1 (MAP kinase 1) (MAPK 1) (EC 2.7.11.24) (ERT1) (Extracellular signal-regulated kinase 2) (ERK-2) (MAP kinase isoform p42) (p42-MAPK) (Mitogen-activated protein kinase 2) (MAP kinase 2) (MAPK 2) | Mapk1 Erk2 Mapk Prkm1 | P63085 | 14 |
| Nascent polypeptide-associated complex subunit alpha, muscle-specific form (Alpha-NAC, muscle-specific form) | Naca Gm1878 | P70670 | 14 |
| Nitric oxide synthase, endothelial (EC 1.14.13.39) (Constitutive NOS) (cNOS) (EC-NOS) (Endothelial NOS) (eNOS) (NOS type III) (NOSIII) | Nos3 Ecnos | P70313 | 14 |
| Nuclear pore complex protein Nup50 (50 kDa nucleoporin) (Nuclear pore-associated protein 60 kDa-like) (Nucleoporin Nup50) | Nup50 Npap60 | Q9JIH2 | 14 |
| Peroxiredoxin-1 (EC 1.11.1.15) (Macrophage 23 kDa stress protein) (Osteoblast-specific factor 3) (OSF-3) (Thioredoxin peroxidase 2) (Thioredoxin-dependent peroxide reductase 2) | Prdx1 Msp23 Paga Tdpx2 | P35700 | 14 |
| Rab GDP dissociation inhibitor beta (Rab GDI beta) (GDI-3) (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) | Gdi2 Gdi3 | Q61598 | 14 |
| Signal transducer and activator of transcription 3 (Acute-phase response factor) | Stat3 Aprf | P42227 | 14 |
| Transcription factor SOX-9 | Sox9 Sox-9 | Q04887 | 14 |
| 40S ribosomal protein S27-like | Rps27l | Q6ZWY3 | 13 |
| 40S ribosomal protein S7 | Rps7 | P62082 | 13 |
| 60S ribosomal protein L13a (Transplantation antigen P198) (Tum-P198 antigen) | Rpl13a P198 Tstap198-7 | P19253 | 13 |
| 60S ribosomal protein L14 | Rpl14 | Q9CR57 | 13 |
| ADP/ATP translocase 2 (ADP,ATP carrier protein 2) (Adenine nucleotide translocator 2) (ANT 2) (Solute carrier family 25 member 5) [Cleaved into: ADP/ATP translocase 2, N-terminally processed] | Slc25a5 Ant2 | P51881 | 13 |
| Calcium-regulated heat stable protein 1 (Calcium-regulated heat-stable protein of 24 kDa) (CRHSP-24) | Carhsp1 | Q9CR86 | 13 |
| Catenin beta-1 (Beta-catenin) | Ctnnb1 Catnb | Q02248 | 13 |
| Caveolin-2 | Cav2 | Q9WVC3 | 13 |
| CD44 antigen (Extracellular matrix receptor III) (ECMR-III) (GP90 lymphocyte homing/adhesion receptor) (HUTCH-I) (Hermes antigen) (Hyaluronate receptor) (Lymphocyte antigen 24) (Ly-24) (Phagocytic glycoprotein 1) (PGP-1) (Phagocytic glycoprotein I) (PGP-I) (CD antigen CD44) | Cd44 Ly-24 | P15379 | 13 |
| Cold shock domain-containing protein E1 | Csde1 D3Jfr1 | Q91W50 | 13 |
| Cyclin-I | Ccni | Q9Z2V9 | 13 |
| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (EC 2.4.99.18) (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDa subunit) (Ribophorin I) (RPN-I) (Ribophorin-1) | Rpn1 | Q91YQ5 | 13 |
| Elongation factor 1-beta (EF-1-beta) | Eef1b Eef1b2 | O70251 | 13 |
| Eukaryotic translation initiation factor 2 subunit 2 (Eukaryotic translation initiation factor 2 subunit beta) (eIF-2-beta) | Eif2s2 | Q99L45 | 13 |
| H-2 class I histocompatibility antigen, Q7 alpha chain (QA-2 antigen) | H2-Q7 | P14429 | 13 |
| Importin-8 (Imp8) (Ran-binding protein 8) (RanBP8) | Ipo8 | Q7TMY7 | 13 |
| Integrin beta-1 (Fibronectin receptor subunit beta) (VLA-4 subunit beta) (CD antigen CD29) | Itgb1 | P09055 | 13 |
| Leptin (Obesity factor) | Lep Ob | P41160 | 13 |
| N-lysine methyltransferase SETD8 (EC 2.1.1.-) (H4-K20-HMTase SETD8) (Histone-lysine N-methyltransferase SETD8) (EC 2.1.1.43) (PR/SET domain-containing protein 07) (PR-Set7) (PR/SET07) (SET domain-containing protein 8) | Setd8 | Q2YDW7 | 13 |
| Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Cyclophilin A) (Cyclosporin A-binding protein) (Rotamase A) (SP18) [Cleaved into: Peptidyl-prolyl cis-trans isomerase A, N-terminally processed] | Ppia | P17742 | 13 |
| Plasminogen activator inhibitor 1 RNA-binding protein (PAI1 RNA-binding protein 1) (PAI-RBP1) (SERPINE1 mRNA-binding protein 1) | Serbp1 Pairbp1 | Q9CY58 | 13 |
| Platelet-derived growth factor receptor alpha (PDGF-R-alpha) (PDGFR-alpha) (EC 2.7.10.1) (Alpha platelet-derived growth factor receptor) (Alpha-type platelet-derived growth factor receptor) (CD140 antigen-like family member A) (Platelet-derived growth factor alpha receptor) (CD antigen CD140a) | Pdgfra | P26618 | 13 |
| Ras-related protein Rab-5A | Rab5a nnyRab5a | Q9CQD1 | 13 |
| Retinoblastoma-associated protein (pRb) (Rb) (pp105) | Rb1 Rb-1 | P13405 | 13 |
| Serine/arginine-rich splicing factor 2 (Protein PR264) (Putative myelin regulatory factor 1) (MRF-1) (Splicing component, 35 kDa) (Splicing factor SC35) (SC-35) (Splicing factor, arginine/serine-rich 2) | Srsf2 Pr264 Sfrs10 Sfrs2 | Q62093 | 13 |
| T-complex protein 1 subunit delta (TCP-1-delta) (A45) (CCT-delta) | Cct4 Cctd | P80315 | 13 |
| Thymosin beta-10 | Tmsb10 Ptmb10 | Q6ZWY8 | 13 |
| Ubiquitin-conjugating enzyme E2 D2 (EC 6.3.2.19) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2(17)KB 2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (Ubiquitin-protein ligase D2) | Ube2d2 Ubc4 Ubch4 Ubch5b Ube2d2a | P62838 | 13 |
| Ubiquitin-conjugating enzyme E2 D3 (EC 6.3.2.19) (Ubiquitin carrier protein D3) (Ubiquitin-conjugating enzyme E2(17)KB 3) (Ubiquitin-conjugating enzyme E2-17 kDa 3) (Ubiquitin-protein ligase D3) | Ube2d3 | P61079 | 13 |
| 14-3-3 protein beta/alpha (Protein kinase C inhibitor protein 1) (KCIP-1) [Cleaved into: 14-3-3 protein beta/alpha, N-terminally processed] | Ywhab | Q9CQV8 | 12 |
| 3-ketoacyl-CoA thiolase, mitochondrial (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Mitochondrial 3-oxoacyl-CoA thiolase) | Acaa2 | Q8BWT1 | 12 |
| 40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3) | Rps2 Llrep3 Rps4 | P25444 | 12 |
| ADP-ribosylation factor-like protein 2-binding protein (ARF-like 2-binding protein) (Binder of ARF2 protein 1) | Arl2bp Bart Bart1 | Q9D385 | 12 |
| Beta-2-microglobulin | B2m | P01887 | 12 |
| Beta-glucuronidase (EC 3.2.1.31) | Gusb Gus Gus-s | P12265 | 12 |
| Bombesin receptor-activated protein C6orf89 homolog | 0 | Q99KU6 | 12 |
| Carnitine O-palmitoyltransferase 1, liver isoform (CPT1-L) (EC 2.3.1.21) (Carnitine O-palmitoyltransferase I, liver isoform) (CPT I) (CPTI-L) (Carnitine palmitoyltransferase 1A) | Cpt1a Cpt-1 Cpt1 | P97742 | 12 |
| Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 (dNTPase) (EC 3.1.5.-) (Interferon-gamma-inducible protein Mg11) (SAM domain and HD domain-containing protein 1) | Samhd1 Mg11 | Q60710 | 12 |
| Desmin | Des | P31001 | 12 |
| Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331) | Fgfr1 Flg | P16092 | 12 |
| High mobility group protein B1 (High mobility group protein 1) (HMG-1) | Hmgb1 Hmg-1 Hmg1 | P63158 | 12 |
| Methyltransferase-like protein 9 (DORA reverse strand protein) (DREV) | Mettl9 drev MNCb-5680 | Q9EPL4 | 12 |
| Mitochondrial import receptor subunit TOM20 homolog (Mitochondrial 20 kDa outer membrane protein) (Outer mitochondrial membrane receptor Tom20) | Tomm20 | Q9DCC8 | 12 |