| Putative neuraminyllactose-binding hemagglutinin homolog (HpaA) | HP_0410 | O25166 | 7 |
| Regulator of sigma D | rsd EcE24377A_4537 | A7ZUL0 | 7 |
| Ribonuclease E (RNase E) (EC 3.1.26.12) | rne BE932_29630 SY51_05985 | A0A066SW99 | 7 |
| Ribonuclease P protein component (RNase P protein) (RNaseP protein) (EC 3.1.26.5) (Protein C5) | rnpA EcE24377A_4214 | A7ZTR0 | 7 |
| Ribose-phosphate pyrophosphokinase (RPPK) (EC 2.7.6.1) (5-phospho-D-ribosyl alpha-1-diphosphate) (Phosphoribosyl diphosphate synthase) (Phosphoribosyl pyrophosphate synthase) (P-Rib-PP synthase) (PRPP synthase) (PRPPase) | prsA prs ACN002_1814 EC3234A_26c01560 ERS085365_01780 ERS085366_02876 ERS085374_03969 ERS085379_03082 ERS085383_03887 ERS085386_04550 ERS085404_03807 ERS085406_00809 ERS085416_00063 ERS139211_04476 ERS139235_02355 ERS150873_03127 ERS150876_02281 FORC28_2894 HW42_10150 JD73_24675 MS6198_13610 PGD_02046 SK85_01326 SM09_02033 | A0A024L4E5 | 7 |
| RNA chaperone ProQ | proQ BE932_04640 BMT97_00710 SY51_10155 | A0A061KX09 | 7 |
| RNA polymerase sigma factor RpoD (Sigma-70) | rpoD rpoDA PA0576 | P26480 | 7 |
| RNA polymerase-binding transcription factor DksA | dksA ECO9455_01595 | K4XHA3 | 7 |
| Rod shape-determining protein MreB | mreB PA4481 | Q9HVU0 | 7 |
| RpoE-regulated lipoprotein | BE932_09760 SY51_14100 | A0A066T7P5 | 7 |
| Serine protease (HtrA) | HP_1019 | O25663 | 7 |
| Soluble pyridine nucleotide transhydrogenase | ECs4890 | C3SIJ5 | 7 |
| Spermidine/putrescine ABC transporter substrate-binding protein | BE932_02815 SY51_08440 | A0A061Y6G2 | 7 |
| Succinylornithine transaminase (EC 2.6.1.81) (Succinylornithine aminotransferase) | astC argM BE932_04195 SY51_09715 | A0A066SS24 | 7 |
| Thiol:disulfide interchange protein (DsbC), putative | HP_0377 | O25140 | 7 |
| Thioredoxin | HP_1458 | O25996 | 7 |
| Transcription termination/antitermination protein NusA | nusA PA4745 | Q9HV54 | 7 |
| Transcriptional regulator Crp | BK337_12080 BUE81_05510 | A0A0A6V8W6 | 7 |
| Transcriptional regulatory protein AlgP (Alginate regulatory protein AlgR3) | algP algR3 PA5253 | P15276 | 7 |
| Trigger factor (TF) (EC 5.2.1.8) (PPIase) | tig ECP_0497 | Q0TKK5 | 7 |
| Type 4 fimbrial biogenesis protein PilF | pilF PA3805 | Q9HXJ2 | 7 |
| UDP-N-acetyl-D-glucosamine 6-dehydrogenase (UDP-D-GlcNAc 6-dehydrogenase) (EC 1.1.1.136) (UDP-N-acetylglucosamine 6-dehydrogenase) | wbpA PA3159 | G3XD94 | 7 |
| Uncharacterized protein | PA0165 | Q9I6W7 | 7 |
| Uncharacterized protein | PA1064 | Q9I4R0 | 7 |
| Uncharacterized protein | PA5258 | Q9HTT7 | 7 |
| Uncharacterized protein | PA4454 | Q9HVW3 | 7 |
| Uncharacterized protein | PA4390 | Q9HW14 | 7 |
| Uncharacterized protein | PA4372 | Q9HW30 | 7 |
| Uncharacterized protein | PA4352 | Q9HW49 | 7 |
| Uncharacterized protein | PA1969 | Q9I2D5 | 7 |
| Uncharacterized protein | PA1293 | Q9I451 | 7 |
| Uncharacterized protein | PA0328 | Q9I6G3 | 7 |
| Uncharacterized protein | PA0434 | Q9I683 | 7 |
| Uncharacterized protein | PA5339 | Q9HTL9 | 7 |
| Uncharacterized protein | HP_0710 | O25414 | 7 |
| Uncharacterized protein | HP_1453 | O25992 | 7 |
| Uncharacterized protein | HP_0231 | O25017 | 7 |
| Uncharacterized protein | HP_0596 | O25318 | 7 |
| Uncharacterized protein | HP_0492 | O25234 | 7 |
| Uncharacterized protein | HP_1454 | O25993 | 7 |
| Uncharacterized protein | HP_0408 | O25164 | 7 |
| Uncharacterized protein | HP_1173 | O25787 | 7 |
| Uncharacterized protein | HP_0129 | O24943 | 7 |
| Uncharacterized protein | HP_0721 | O25423 | 7 |
| Uncharacterized protein | HP_0953 | O25607 | 7 |
| Uncharacterized protein | HP_0203 | O24995 | 7 |
| Uncharacterized protein | HP_0719 | O25421 | 7 |
| Uncharacterized protein | HP_1524 | O26052 | 7 |
| Uncharacterized protein | HP_0130 | O24944 | 7 |
| Uncharacterized protein | HP_0783 | O25472 | 7 |
| Uncharacterized protein | EcE24377A_3716 | A7ZSC7 | 7 |
| UPF0323 lipoprotein HP_0232 | HP_0232 | O25018 | 7 |
| Xanthine phosphoribosyltransferase (EC 2.4.2.22) (Xanthine-guanine phosphoribosyltransferase) (XGPRT) | gpt EcE24377A_0270 | A7ZHZ7 | 7 |
| YfiB | yfiB PA1119 | Q9I4L6 | 7 |
| 2', 3'-cyclic nucleotide 2'-phosphodiesterase (EC 3.1.3.6) (EC 3.1.4.16) (2',3'-cyclic-nucleotide 2'-phosphodiesterase) | cpdB ACN77_16580 ACN81_01310 BE932_21600 PU06_09425 SY51_24290 | A0A066SZ10 | 6 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase) | fabZ EcE24377A_0184 | A7ZHS0 | 6 |
| 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Fatty acid oxidation complex subunit beta) | fadA A4T40_23820 BE963_10510 BK334_25275 BMT91_13160 ECONIH1_22640 ERS085366_03114 MS6198_44340 | A0A0A1ACP7 | 6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) (KPHMT) | panB BMT91_01540 PGD_03773 | A0A024L8L2 | 6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase) (Beta-Ketoacyl-acyl carrier protein reductase) (Beta-ketoacyl-ACP reductase) | fabG PA2967 | O54438 | 6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase FabG (NAD(P)-dependent oxidoreductase) (Oxidoreductase UcpA) (Short chain dehydrogenase) (EC 1.-.-.-) (EC 1.1.1.100) (Short-chain dehydrogenase) | ucpA fabG_3 A4T40_17395 A4T50_05690 A5958_18380 AMK83_10720 APT94_12830 APU18_00735 BE932_09740 BE949_09655 BIQ85_13730 BK248_17210 BK334_04110 BK373_06375 BK375_00370 BK383_23685 BMT49_15725 BMT94_11525 BUE82_06415 BXT93_17555 ECONIH1_13960 ERS085366_00393 ERS085379_01033 ERS085406_01993 GJ11_16000 MJ49_18735 MS6198_27490 SM09_02578 SY51_14080 UC41_26070 UN86_00530 WM48_12860 | E2QPR1 | 6 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.179) (3-oxoacyl-[acyl-carrier-protein] synthase II) (Beta-ketoacyl-ACP synthase II) (KAS II) | fabF Z1734 ECs1473 | P0AAI7 | 6 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) | fabH APT94_19175 BE932_29665 BE949_11475 BIQ85_06460 BMT61_00060 BMT94_14915 BMT97_12845 ERS139235_03930 HMPREF3040_00120 SM09_01928 SY51_06020 WQ89_17030 | A0A066SNJ4 | 6 |
| 30S ribosomal protein S11 | rpsK BE932_15430 SY51_18940 | A0A061YF40 | 6 |
| 30S ribosomal protein S13 | rpsM PA4241 | Q9HWF7 | 6 |
| 30S ribosomal protein S21 | rpsU CKO_04462 | A8APV6 | 6 |
| 30S ribosomal protein S6 | rpsF PA4935 | Q9HUM9 | 6 |
| 30S ribosomal protein S8 | rpsH PA4249 | Q9HWE9 | 6 |
| 4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) (EC 1.13.11.27) | hpd PA0865 | Q9I576 | 6 |
| 50S ribosomal protein L10 | rplJ PA4272 | Q9HWC7 | 6 |
| 50S ribosomal protein L16 | rplP PA4256 | Q9HWE2 | 6 |
| 50S ribosomal protein L16 | rplP CKO_04727 | A8AQK9 | 6 |
| 50S ribosomal protein L16 3-hydroxylase (EC 1.14.11.47) (Ribosomal oxygenase RoxA) (ROX) | roxA ycfD b1128 JW1114 | P27431 | 6 |
| 50S ribosomal protein L2 | rplB EcE24377A_3800 | A7ZSK6 | 6 |
| 50S ribosomal protein L25 | rplY E2348C_2332 | B7UFK2 | 6 |
| 50S ribosomal protein L28 | rpmB EcE24377A_4138 | A7ZTI8 | 6 |
| 50S ribosomal protein L29 | rpmC EcE24377A_3795 | A7ZSK1 | 6 |
| 50S ribosomal protein L7/L12 | rplL EcE24377A_4527 | A7ZUK0 | 6 |
| 6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (EC 2.5.1.78) | ribH ribE PA4053 | Q9HWX5 | 6 |
| 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | gnd A4T50_03140 | A0A0A8J3T5 | 6 |
| ABC transporter substrate-binding protein | BE932_04230 SY51_09745 | A0A061KZT2 | 6 |
| ABC transporter substrate-binding protein (Osmoprotectant uptake system substrate-binding protein) | BE932_08215 SY51_12275 | A0A061L7G7 | 6 |
| Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (ACCase subunit alpha) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (EC 6.4.1.2) | accA EcE24377A_0189 | A7ZHS5 | 6 |
| Acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) | aceF BE932_23675 SY51_00680 | A0A061YC03 | 6 |
| Acid stress chaperone HdeA | hdeA A4T40_23275 BK334_07110 BK373_21410 ECONIH1_20465 MJ49_12700 MS6198_40200 | A0A0A1ADZ6 | 6 |
| Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS) | alaS BE932_11415 SY51_15170 | A0A066SUV7 | 6 |
| Aldehyde reductase (NADH-dependent alcohol dehydrogenase) (NADPH-dependent broad range aldehyde dehydrogenase YqhD) (Putative alcohol dehydrogenase) (EC 1.1.1.-) | yqhD AA102_07150 ACN77_09885 ACN81_21185 ACU90_12475 AML07_14450 APZ14_15640 AUS26_10905 BE957_07335 BHS81_18255 BK251_24110 BK292_11135 BMT53_19135 ERS085374_02402 ERS139235_01393 ERS150876_02932 FORC28_0801 GJ12_19405 HW42_19915 PU06_26450 | A0A066QAC7 | 6 |
| Aldo/keto reductase (NADP(H)-dependent aldo-keto reductase) | tas BE932_12300 SY51_16055 | A0A066SVB9 | 6 |
| Aminotransferase (EC 2.6.1.-) | A4T50_19630 APU18_21770 BE932_28890 BET08_14045 SY51_05265 WM48_04840 | A0A066SNX8 | 6 |
| Aminotransferase (EC 2.6.1.2) (Glutamate--pyruvate aminotransferase AlaA) (Glutamate-pyruvate aminotransferase AlaA) | alaA A4T40_16785 BK334_03490 ECONIH1_13340 MS6198_26240 | A0A0A1AA97 | 6 |
| AmpDh3 | ampDh3 PA0807 | Q9I5D1 | 6 |
| Anti-sigma E factor (Sigma-E factor regulatory protein RseB) | rseB BE932_10660 SY51_14720 | A0A061L1V1 | 6 |
| Aspartate ammonia-lyase (Aspartase) (EC 4.3.1.1) | aspA BX23_25425 | A0A028DUM6 | 6 |
| Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS) | aspS CE10_2152 | A0A0E0V5W3 | 6 |
| Aspartate-semialdehyde dehydrogenase (Putative semialdehyde dehydrogenase) (Semialdehyde dehydrogenase) (USG-1 protein) | usg A4T40_16930 A5958_18865 AC067_01625 AM270_05710 AMK83_13660 AML07_04530 APT94_13540 APZ14_22080 AUS26_02060 AWP75_23125 BE932_09210 BE949_08845 BE957_11430 BIQ85_13235 BK248_00670 BK251_17835 BK292_05470 BK334_03640 BK373_06860 BK400_08050 BMT49_14885 BMT53_24435 BMT61_11355 BMT94_10990 BMT97_08675 BXT93_15260 ECONIH1_13490 ERS085366_01188 ERS085379_00224 ERS085386_00172 ERS139235_00414 ERS150876_02623 FORC28_1696 HW42_16360 MJ49_19215 MS6198_26530 PU06_12755 SM09_02439 SY51_13240 UN86_09755 WQ89_02230 | A0A066T4P2 | 6 |
| ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit) | atpG E2348C_4043 | B7UMJ8 | 6 |
| ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha) | atpA EcE24377A_4250 | A7ZTU6 | 6 |
| ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b) | atpF EcE24377A_4252 | A7ZTU8 | 6 |
| ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta) | atpD EcE24377A_4247 | A7ZTU4 | 6 |
| ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta) | atpH PA5557 | Q9HT17 | 6 |
| ATP-dependent Clp protease proteolytic subunit 2 (EC 3.4.21.92) (Endopeptidase Clp 2) | clpP2 PA3326 | Q9HYR9 | 6 |