| ATP-dependent RNA helicase DDX3Y (EC 3.6.4.13) (D1Pas1-related sequence 1) (DEAD box protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2) (mDEAD2) | Ddx3y D1Pas1-rs1 Dead2 | Q62095 | 9 |
| B-cell receptor-associated protein 31 (BCR-associated protein 31) (Bap31) (p28) | Bcap31 Bap31 | Q61335 | 9 |
| Baculoviral IAP repeat-containing protein 6 (EC 2.3.2.27) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (RING-type E3 ubiquitin transferase BIRC6) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON) | Birc6 Kiaa1289 | O88738 | 9 |
| Beta-galactosidase (EC 3.2.1.23) (Acid beta-galactosidase) (Lactase) | Glb1 Bgl Glb-1 | P23780 | 9 |
| Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 (BAI1-associated protein 2-like protein 1) (Insulin receptor tyrosine kinase substrate) | Baiap2l1 Irtks | Q9DBJ3 | 9 |
| C-terminal-binding protein 2 (CtBP2) | Ctbp2 | P56546 | 9 |
| Cadherin-1 (ARC-1) (Epithelial cadherin) (E-cadherin) (Uvomorulin) (CD antigen CD324) [Cleaved into: E-Cad/CTF1; E-Cad/CTF2; E-Cad/CTF3] | Cdh1 | P09803 | 9 |
| Carboxypeptidase Q (EC 3.4.17.-) (Hematopoietic lineage switch 2) (Plasma glutamate carboxypeptidase) | Cpq Hls2 Pgcp | Q9WVJ3 | 9 |
| CCR4-NOT transcription complex subunit 1 (CCR4-associated factor 1) | Cnot1 Kiaa1007 | Q6ZQ08 | 9 |
| CD44 antigen (Putative uncharacterized protein) | Cd44 | Q3U8S1 | 9 |
| Cell cycle control protein 50A (P4-ATPase flippase complex beta subunit TMEM30A) (Transmembrane protein 30A) | Tmem30a Cdc50a D9Wsu20e | Q8VEK0 | 9 |
| Cell division cycle protein 23 homolog (Anaphase-promoting complex subunit 8) (APC8) (Cyclosome subunit 8) | Cdc23 Anapc8 | Q8BGZ4 | 9 |
| Centromere/kinetochore protein zw10 homolog | Zw10 | O54692 | 9 |
| Centrosomal protein of 162 kDa (Cep162) (Protein QN1 homolog) | Cep162 Kiaa1009 Qn1 | Q6ZQ06 | 9 |
| Charged multivesicular body protein 1b-1 (Chromatin-modifying protein 1b-1) (CHMP1b-1) | Chmp1b1 Chmp1b | Q99LU0 | 9 |
| Chromobox protein homolog 3 (Heterochromatin protein 1 homolog gamma) (HP1 gamma) (M32) (Modifier 2 protein) | Cbx3 | P23198 | 9 |
| Coiled-coil domain-containing protein 22 | Ccdc22 DXImx40e | Q9JIG7 | 9 |
| COMM domain-containing protein 3 (Bmi-1 upstream gene protein) (Bup protein) | Commd3 Bup | Q63829 | 9 |
| Complement C1q subcomponent subunit B | C1qb | P14106 | 9 |
| Complement C1q subcomponent subunit C | C1qc C1qg | Q02105 | 9 |
| Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain] | C5 Hc | P06684 | 9 |
| Coxsackievirus and adenovirus receptor homolog (CAR) (mCAR) | Cxadr Car | P97792 | 9 |
| Cytochrome b5 | Cyb5a Cyb5 | P56395 | 9 |
| Cytochrome c oxidase subunit 6B1 (Cytochrome c oxidase subunit VIb isoform 1) (COX VIb-1) | Cox6b1 Cox6b | P56391 | 9 |
| Cytochrome c, somatic | Cycs | P62897 | 9 |
| Cytochrome c1, heme protein, mitochondrial (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4) (Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit) (Cytochrome c-1) | Cyc1 | Q9D0M3 | 9 |
| Cytoplasmic protein NCK2 (Growth factor receptor-bound protein 4) (NCK adaptor protein 2) (Nck-2) (SH2/SH3 adaptor protein NCK-beta) | Nck2 Grb4 | O55033 | 9 |
| Cytoskeleton-associated protein 4 (63-kDa cytoskeleton-linking membrane protein) (Climp-63) (p63) | Ckap4 | Q8BMK4 | 9 |
| Cytoskeleton-associated protein 5 | Ckap5 | A2AGT5 | 9 |
| Dedicator of cytokinesis protein 7 (Protein moonlight) | Dock7 Gm430 Kiaa1771 Mnlt | Q8R1A4 | 9 |
| Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b) | Ddr2 Ntrkr3 Tkt Tyro10 | Q62371 | 9 |
| DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (EC 2.7.7.6) (DNA-directed RNA polymerase II subunit A) (DNA-directed RNA polymerase III largest subunit) | Polr2a Rpii215 Rpo2-1 | P08775 | 9 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC3 (RNA polymerases I, II, and III subunit ABC3) (DNA-directed RNA polymerase II subunit H) (RPB17) (RPB8 homolog) | Polr2h | Q923G2 | 9 |
| DnaJ heat shock protein family (Hsp40) member C13 (MCG115602) | Dnajc13 mCG_115602 | G3X922 | 9 |
| DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) (HSP40) (Heat shock protein 40) | Dnajb1 Hsp40 Hspf1 | Q9QYJ3 | 9 |
| Echinoderm microtubule-associated protein-like 2 (EMAP-2) | Eml2 | Q7TNG5 | 9 |
| Ectonucleoside triphosphate diphosphohydrolase 2 (NTPDase 2) (EC 3.6.1.-) (CD39 antigen-like 1) (Ecto-ATP diphosphohydrolase 2) (Ecto-ATPDase 2) (Ecto-ATPase 2) | Entpd2 Cd39l1 | O55026 | 9 |
| Endothelin-converting enzyme 1 (ECE-1) (EC 3.4.24.71) | Ece1 | Q4PZA2 | 9 |
| Exportin-7 (Exp7) (Ran-binding protein 16) | Xpo7 Kiaa0745 Ranbp16 | Q9EPK7 | 9 |
| Extracellular sulfatase Sulf-2 (mSulf-2) (EC 3.1.6.-) | Sulf2 | Q8CFG0 | 9 |
| F-box/WD repeat-containing protein 11 (F-box and WD repeats protein beta-TrCP2) (F-box/WD repeat-containing protein 1B) (Homologous to Slimb protein) (HOS) | Fbxw11 Btrcp2 Fbw1b Fbxw1b | Q5SRY7 | 9 |
| FERM domain-containing protein 8 | Frmd8 | Q3UFK8 | 9 |
| Fibrinogen alpha chain [Cleaved into: Fibrinopeptide A; Fibrinogen alpha chain] | Fga | E9PV24 | 9 |
| Focal adhesion kinase 1 (FADK 1) (EC 2.7.10.2) (Focal adhesion kinase-related nonkinase) (FRNK) (Protein-tyrosine kinase 2) (p125FAK) (pp125FAK) | Ptk2 Fadk Fak Fak1 Kiaa4203 | P34152 | 9 |
| G protein-coupled receptor kinase 6 (EC 2.7.11.16) (G protein-coupled receptor kinase GRK6) | Grk6 Gprk6 | O70293 | 9 |
| G-protein coupled receptor family C group 5 member B (Retinoic acid-induced gene 2 protein) (RAIG-2) | Gprc5b Raig2 | Q923Z0 | 9 |
| Gamma-enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (Enolase 2) (Neural enolase) (Neuron-specific enolase) (NSE) | Eno2 Eno-2 | P17183 | 9 |
| Gamma-glutamyltranspeptidase 1 (GGT 1) (EC 2.3.2.2) (Gamma-glutamyltransferase 1) (Glutathione hydrolase 1) (EC 3.4.19.13) (Leukotriene-C4 hydrolase) (EC 3.4.19.14) (CD antigen CD224) [Cleaved into: Gamma-glutamyltranspeptidase 1 heavy chain; Gamma-glutamyltranspeptidase 1 light chain] | Ggt1 Ggt Ggtp | Q60928 | 9 |
| General vesicular transport factor p115 (Protein USO1 homolog) (Transcytosis-associated protein) (TAP) (Vesicle-docking protein) | Uso1 Vdp | Q9Z1Z0 | 9 |
| Glucosamine-6-phosphate isomerase 1 (EC 3.5.99.6) (Glucosamine-6-phosphate deaminase 1) (GNPDA 1) (GlcN6P deaminase 1) (Oscillin) | Gnpda1 Gnpi | O88958 | 9 |
| Glutaredoxin-1 (Thioltransferase-1) (TTase-1) | Glrx Glrx1 Grx Grx1 | Q9QUH0 | 9 |
| Glypican-4 (K-glypican) [Cleaved into: Secreted glypican-4] | Gpc4 | P51655 | 9 |
| GTP-binding protein SAR1a (Putative uncharacterized protein) (SAR1 gene homolog A (S. cerevisiae)) (SAR1 gene homolog A (S. cerevisiae), isoform CRA_b) | Sar1a Sara1 mCG_15771 | Q99JZ4 | 9 |
| Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (G gamma-I) | Gng2 | P63213 | 9 |
| H-2 class I histocompatibility antigen, D-D alpha chain (H-2D(D)) | H2-D1 | P01900 | 9 |
| H-2 class I histocompatibility antigen, K-K alpha chain (H-2K(K)) | H2-K1 H2-K | P04223 | 9 |
| Heat shock 70 kDa protein 13 (Microsomal stress-70 protein ATPase core) (Stress-70 protein chaperone microsome-associated 60 kDa protein) | Hspa13 Stch | Q8BM72 | 9 |
| Heat shock 70 kDa protein 14 (NST-1) (hsr.1) | Hspa14 Hsp70-4 | Q99M31 | 9 |
| Heat shock protein beta-1 (HspB1) (Growth-related 25 kDa protein) (Heat shock 25 kDa protein) (HSP 25) (Heat shock 27 kDa protein) (HSP 27) (p25) | Hspb1 Hsp25 Hsp27 | P14602 | 9 |
| Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48) (Histone acetyltransferase 1) | Hat1 | Q8BY71 | 9 |
| Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein) | Hdac2 Yy1bp | P70288 | 9 |
| Histone H2A type 1-K | Hist1h2ak | Q8CGP7 | 9 |
| Histone H2B type 1-A (Histone H2B, testis) (Testis-specific histone H2B) | Hist1h2ba Th2b | P70696 | 9 |
| Hydroxymethylglutaryl-CoA lyase, mitochondrial (HL) (HMG-CoA lyase) (EC 4.1.3.4) (3-hydroxy-3-methylglutarate-CoA lyase) | Hmgcl | P38060 | 9 |
| Ig gamma-1 chain C region secreted form | Ighg1 Igh-4 | P01868 | 9 |
| Immunity-related GTPase family M protein 1 (EC 3.6.5.-) (Interferon-inducible GTPase 3) (Interferon-inducible protein 1) (LPS-stimulated RAW 264.7 macrophage protein 47) (LRG-47) | Irgm1 Ifi1 Iigp3 Irgm | Q60766 | 9 |
| Immunoglobulin J chain | Jchain Igj | P01592 | 9 |
| Importin subunit alpha-3 (Importin alpha Q1) (Qip1) (Karyopherin subunit alpha-4) | Kpna4 Qip1 | O35343 | 9 |
| Insulin-degrading enzyme (Fragment) | Ide | F6RPJ9 | 9 |
| Insulin-like growth factor 2 mRNA-binding protein 3 (IGF2 mRNA-binding protein 3) (IMP-3) (mIMP-3) (IGF-II mRNA-binding protein 3) (VICKZ family member 3) | Igf2bp3 Vickz3 | Q9CPN8 | 9 |
| Integrin alpha-M (CD11 antigen-like family member B) (CR-3 alpha chain) (Cell surface glycoprotein MAC-1 subunit alpha) (Leukocyte adhesion receptor MO1) (CD antigen CD11b) | Itgam | P05555 | 9 |
| Keratin, type I cytoskeletal 13 (47 kDa cytokeratin) (Cytokeratin-13) (CK-13) (Keratin-13) (K13) | Krt13 Krt1-13 | P08730 | 9 |
| Kinesin-like protein KIF2A (Kinesin-2) | Kif2a Kif2 Kns2 | P28740 | 9 |
| Lamina-associated polypeptide 2, isoforms alpha/zeta (Thymopoietin isoforms alpha/zeta) (TP alpha/zeta) | Tmpo Lap2 | Q61033 | 9 |
| Legumain (EC 3.4.22.34) (Asparaginyl endopeptidase) (Protease, cysteine 1) | Lgmn Prsc1 | O89017 | 9 |
| Leukocyte elastase inhibitor A (Serine protease inhibitor EIA) (Serpin B1a) | Serpinb1a Serpinb1 | Q9D154 | 9 |
| Lipoma-preferred partner homolog | Lpp | Q8BFW7 | 9 |
| Lipopolysaccharide-binding protein (LBP) | Lbp | Q61805 | 9 |
| Major vault protein | Mvp | E9Q3X0 | 9 |
| Maspardin (Acid cluster protein 33) (Spastic paraplegia 21 autosomal recessive Mast syndrome protein homolog) | Spg21 | Q9CQC8 | 9 |
| MCG21756, isoform CRA_b (Nucleoporin 205) (Nup205 protein) | Nup205 mCG_21756 | B9EJ54 | 9 |
| Metal transporter CNNM4 (Ancient conserved domain-containing protein 4) (mACDP4) (Cyclin-M4) | Cnnm4 Acdp4 Kiaa1592 | Q69ZF7 | 9 |
| Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3) | Timp3 Sun Timp-3 | P39876 | 9 |
| Methionine adenosyltransferase 2 subunit beta (Methionine adenosyltransferase II beta) (MAT II beta) | Mat2b | Q99LB6 | 9 |
| Methionine aminopeptidase 1 (MAP 1) (MetAP 1) (EC 3.4.11.18) (Peptidase M 1) | Metap1 | Q8BP48 | 9 |
| Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein) | Mri1 | Q9CQT1 | 9 |
| MICOS complex subunit Mic60 (Mitochondrial inner membrane protein) (Mitofilin) | Immt Mic60 | Q8CAQ8 | 9 |
| MMS19 nucleotide excision repair protein homolog (MET18 homolog) (MMS19-like protein) | Mms19 Mms19l | Q9D071 | 9 |
| Myelin proteolipid protein (PLP) (Lipophilin) | Plp1 Plp | P60202 | 9 |
| N-alpha-acetyltransferase 25, NatB auxiliary subunit (Mitochondrial distribution and morphology protein 20) (N-terminal acetyltransferase B complex subunit MDM20) (NatB complex subunit MDM20) (N-terminal acetyltransferase B complex subunit NAA25) | Naa25 Mdm20 | Q8BWZ3 | 9 |
| NAD-dependent malic enzyme, mitochondrial (NAD-ME) (EC 1.1.1.38) (Malic enzyme 2) | Me2 | Q99KE1 | 9 |
| NAD-dependent protein deacetylase sirtuin-2 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 2) (SIR2-like protein 2) (mSIR2L2) | Sirt2 Sir2l2 | Q8VDQ8 | 9 |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-30kD) (CI-30kD) (NADH-ubiquinone oxidoreductase 30 kDa subunit) | Ndufs3 | Q9DCT2 | 9 |
| NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 2.3.2.26) (HECT-type E3 ubiquitin transferase WWP1) (WW domain-containing protein 1) | Wwp1 | Q8BZZ3 | 9 |
| NEDD8-activating enzyme E1 regulatory subunit (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) (Amyloid protein-binding protein 1) | Nae1 Appbp1 | Q8VBW6 | 9 |
| Neogenin | Neo1 | E9QK04 | 9 |
| Netrin receptor UNC5B (Protein unc-5 homolog 2) (Protein unc-5 homolog B) | Unc5b Unc5h2 | Q8K1S3 | 9 |
| Neural Wiskott-Aldrich syndrome protein (N-WASP) | Wasl | Q91YD9 | 9 |
| Neuronal calcium sensor 1 (NCS-1) (Frequenin homolog) | Ncs1 Freq | Q8BNY6 | 9 |
| Neutrophil collagenase (EC 3.4.24.34) (Collagenase 2) (Matrix metalloproteinase-8) (MMP-8) | Mmp8 | O70138 | 9 |